RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GPR176Q14439 515 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 PNKDQ8N490 385 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 OR5R1Q8NH85 324 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 TNFAIP8L1Q8WVP5 186 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 ZNF714Q96N38 554 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 ZNF747Q9BV97 191 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 CHST6Q9GZX3 395 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
SEC13-208ENST00000397109 KIAA2026Q5HYC2 2103 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 SIRPB1O00241 398 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 RBBP9O75884 186 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 NDUFA7O95182 113 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 OR2H2O95918 312 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 ZNF44P15621 663 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 GDNFP39905 211 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 OR3A1P47881 315 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 OR3A4PP47883 348 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 KLF9Q13886 244 aaPredicted RBP11.86□□□□□ -0.51
SEC13-208ENST00000397109 PLA1AQ53H76 456 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 ELP2Q6IA86 826 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 OR4S1Q8NGB4 309 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 OR4D6Q8NGJ1 314 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 OR13D1Q8NGV5 346 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 NUBP2Q9Y5Y2 271 aa11.86□□□□□ -0.51
SEC13-208ENST00000397109 FBN3Q75N90 2809 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 LINC00854A0A1B0GVQ3 168 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 DEGS1O15121 323 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 LANCL1O43813 399 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 GPR137BO60478 399 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 CSN2P05814 226 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 CD3GP09693 182 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 PRSS3P35030 304 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 FAUP35544 74 aaKnown RBP11.85□□□□□ -0.51
SEC13-208ENST00000397109 P2RX3P56373 397 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 DGCR2P98153 550 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 AANATQ16613 207 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 Q6P435 159 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 SHISA2Q6UWI4 295 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 DRAXINQ8NBI3 349 aaPredicted RBP11.85□□□□□ -0.51
SEC13-208ENST00000397109 KCNG3Q8TAE7 436 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 ATG5Q9H1Y0 275 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 C1RLQ9NZP8 487 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 MTFP1Q9UDX5 166 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 VPREB3Q9UKI3 123 aa11.85□□□□□ -0.51
SEC13-208ENST00000397109 UBE2J1Q9Y385 318 aaPredicted RBP11.85□□□□□ -0.51
SEC13-208ENST00000397109 ANKRD20A5PA0PJZ0 165 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 HMX3A6NHT5 357 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
SEC13-208ENST00000397109 DHFRP00374 187 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 CSF1P09603 554 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 IGHV1-8P0DP01 117 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 COX7A1P24310 79 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 ACTBP60709 375 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 IL13RA2Q14627 380 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 RSU1Q15404 277 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 TAF9Q16594 264 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
SEC13-208ENST00000397109 AKAP14Q86UN6 197 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 OR51T1Q8NGJ9 327 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 OR52I2Q8NH67 350 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 SGMS2Q8NHU3 365 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 FAM46BQ96A09 425 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 S100A13Q99584 98 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 NKX3-1Q99801 234 aaPredicted RBP11.84□□□□□ -0.51
SEC13-208ENST00000397109 PCDHB16Q9NRJ7 776 aa11.84□□□□□ -0.51
SEC13-208ENST00000397109 MRPS28Q9Y2Q9 187 aaKnown RBP11.84□□□□□ -0.51
SEC13-208ENST00000397109 TBL2Q9Y4P3 447 aaKnown RBP11.84□□□□□ -0.51
SEC13-208ENST00000397109 TRGV10A0A0A0MS01 117 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 TMEM14DPA8MWL7 114 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 INMT-MINDY4F8WBC2 141 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
SEC13-208ENST00000397109 OMGP23515 440 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 QRFPP83859 136 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 MADCAM1Q13477 382 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 ARL6IP1Q15041 203 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 NHLRC3Q5JS37 347 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 OLFML2AQ68BL7 652 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 TCF23Q7RTU1 214 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 OR11H6Q8NGC7 330 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 CORO2AQ92828 525 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 MRPS24Q96EL2 167 aaKnown RBP11.83□□□□□ -0.52
SEC13-208ENST00000397109 METTL9Q9H1A3 318 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 MMP28Q9H239 520 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 PPA2Q9H2U2 334 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 TAS2R3Q9NYW6 316 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 SESN1Q9Y6P5 492 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A8PA6NJQ4 464 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms