RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SSTR5P35346 364 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 VEGFCP49767 419 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 TMEM50BP56557 158 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 UBA52P62987 128 aaKnown RBP13.45□□□□□ -0.26
CXCL1-201ENST00000395761 MIDNQ504T8 468 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 LDLRAD2Q5SZI1 272 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 LHFPL4Q7Z7J7 247 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 GAPTQ8N292 157 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 OR11H6Q8NGC7 330 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 OR4K15Q8NH41 348 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 ATG5Q9H1Y0 275 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 LINC00574Q9H8X3 128 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 TNFRSF19Q9NS68 423 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 ADAM30Q9UKF2 790 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 HSF4Q9ULV5 492 aa13.45□□□□□ -0.26
CXCL1-201ENST00000395761 NPIPB11E5RHQ5 1161 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 RGS5O15539 181 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 EIF4EP06730 217 aaKnown RBP13.44□□□□□ -0.26
CXCL1-201ENST00000395761 LTC4SQ16873 150 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 ZNF626Q68DY1 528 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 DYNAPQ8N1N2 210 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 ABHD12Q8N2K0 398 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
CXCL1-201ENST00000395761 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 OR10R2Q8NGX6 335 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 UBALD1Q8TB05 177 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 TMEM158Q8WZ71 300 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 KIRREL1Q96J84 757 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 CLEC7AQ9BXN2 247 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 ZNF286AQ9HBT8 521 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 DIABLOQ9NR28 239 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 COL6A5A8TX70 2615 aa13.44□□□□□ -0.26
CXCL1-201ENST00000395761 C15orf65H3BRN8 121 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 TRIM77I1YAP6 450 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 XRCC3O43542 346 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 IGHV4-59P01825 116 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 FBP1P09467 338 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 RCC1P18754 421 aaPredicted RBP13.43□□□□□ -0.26
CXCL1-201ENST00000395761 GZMHP20718 246 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 NFYBP25208 207 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 TNFSF8P32971 234 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 S100A5P33763 92 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 IER3P46695 156 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 LGALS4P56470 323 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 ARL6IP1Q15041 203 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 OR52W1Q6IF63 320 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 Q6ZTK2 550 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 C5orf24Q7Z6I8 188 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 LDLRAD3Q86YD5 345 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 LAX1Q8IWV1 398 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 MRPL30Q8TCC3 161 aaKnown RBP13.43□□□□□ -0.26
CXCL1-201ENST00000395761 PHF21AQ96BD5 680 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.43□□□□□ -0.26
CXCL1-201ENST00000395761 PLEKHJ1Q9NW61 149 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 IDI2-AS1Q9NZ38 188 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 ZNRD1Q9P1U0 126 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 TRAPPC2LQ9UL33 140 aa13.43□□□□□ -0.26
CXCL1-201ENST00000395761 FAM25AB3EWG3 89 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 FAM25CB3EWG5 89 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 FAM25GB3EWG6 89 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 CLDN34H7C241 214 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 HAX1O00165 279 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 CA11O75493 328 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 IGHV3-7P01780 117 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 MNDAP41218 407 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 MOGAT2Q3SYC2 334 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 FAM216AQ8WUB2 273 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 ZFAND2BQ8WV99 257 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 LEAP2Q969E1 77 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 ARL11Q969Q4 196 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 RAB3CQ96E17 227 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 ARHGAP5-AS1Q96IT6 56 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 SOSTQ9BQB4 213 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 C19orf24Q9BVV8 132 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 RABL2AQ9UBK7 228 aaPredicted RBP13.42□□□□□ -0.26
CXCL1-201ENST00000395761 RABL2BQ9UNT1 228 aa13.42□□□□□ -0.26
CXCL1-201ENST00000395761 A0A087X0M5 115 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 A0A1B0GX30 115 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 C12orf77C9JDV5 145 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 ORC5O43913 435 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 RNASE1P07998 156 aaKnown RBP13.41□□□□□ -0.26
CXCL1-201ENST00000395761 CD34P28906 385 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 ZNF260Q3ZCT1 412 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 PLAC9Q5JTB6 97 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
CXCL1-201ENST00000395761 Q6ZPA2 131 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 CCDC190Q86UF4 302 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 BEND2Q8NDZ0 799 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 OR4P4Q8NGL7 312 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 SSMEM1Q8WWF3 244 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 TAF15Q92804 592 aaKnown RBP eCLIP13.41□□□□□ -0.26
CXCL1-201ENST00000395761 DIRAS2Q96HU8 199 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 PECRQ9BY49 303 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 MEGF9Q9H1U4 602 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 AK3Q9UIJ7 227 aa13.41□□□□□ -0.26
CXCL1-201ENST00000395761 IGLV1-47P01700 117 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 GSTP1P09211 210 aaKnown RBP13.4□□□□□ -0.26
CXCL1-201ENST00000395761 HIST1H1DP16402 221 aaKnown RBP13.4□□□□□ -0.26
CXCL1-201ENST00000395761 TALDO1P37837 337 aa13.4□□□□□ -0.26
CXCL1-201ENST00000395761 ETV6P41212 452 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms