RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 MCTS1Q9ULC4 181 aaKnown RBP10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 OR6C6A6NF89 314 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 HAND1O96004 215 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 IGKV1D-16P01601 117 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 ESDP10768 282 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 THBS3P49746 956 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 FAM71F2Q6NXP2 309 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 KCTD18Q6PI47 426 aaPredicted RBP10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 C6orf201Q7Z4U5 140 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 ARHGEF39Q8N4T4 335 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 C18orf12Q96KH6 178 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 LRFN3Q9BTN0 628 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 POLR1DQ9Y2S0 133 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF850A8MQ14 1090 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF728P0DKX0 622 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 IGLL1P15814 213 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 CTLA4P16410 223 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 FOXL2P58012 376 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 LCN2P80188 198 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 SRSF7Q16629 238 aaKnown RBP eCLIP10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 Q56UQ5 140 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF841Q6ZN19 808 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 CMTM8Q8IZV2 173 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 C8orf44Q96CB5 159 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 MSI2Q96DH6 328 aaKnown RBP10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 AGMATQ9BSE5 352 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 TRAV1-1A0A0B4J248 108 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 CRYAAP02489 173 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 CT62P0C5K7 136 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 DEFA4P12838 97 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 CLDN15P56746 228 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 RPS20P60866 119 aaKnown RBP10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 BAXQ07812 192 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 LRRC75AQ8NAA5 344 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 FAM216AQ8WUB2 273 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 KLF16Q9BXK1 252 aaPredicted RBP10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 SMPXQ9UHP9 88 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 R4GMQ9 66 aa10.79□□□□□ -0.68
SLC28A1-203ENST00000394573 MYO7BQ6PIF6 2116 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 ASCC3Q8N3C0 2202 aaKnown RBP10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 C2orf72A6NCS6 295 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 HS3ST1O14792 307 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 GNRHRP30968 328 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 CKS1BP61024 79 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 C1QL2Q7Z5L3 287 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 FAM58AQ8N1B3 248 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF114Q8NC26 417 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 OR5P3Q8WZ94 311 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 NAT6Q93015 286 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 FAM71F1Q96KD3 344 aaPredicted RBP10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 DERL1Q9BUN8 251 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 CDC42EP3Q9UKI2 254 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 CHST1O43916 411 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 IFNA1P01562 189 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 HNRNPA2B1P22626 353 aaKnown RBP10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 IER3P46695 156 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 TCEA2Q15560 299 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 PRTGQ2VWP7 1150 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 DEFB134Q4QY38 66 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 STPG3Q8N7X2 389 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 OR2Z1Q8NG97 314 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 C1orf147Q96MC9 270 aaPredicted RBP10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 TM2D1Q9BX74 207 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 OR10A2Q9H208 303 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 MBNL1Q9NR56 388 aaKnown RBP10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 HEBP2Q9Y5Z4 205 aa10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 MKI67P46013 3256 aaKnown RBP10.78□□□□□ -0.68
SLC28A1-203ENST00000394573 FCN1O00602 326 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 SLC25A17O43808 307 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 IFNA5P01569 189 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 C8AP07357 584 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 IGLC1P0CG04 106 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 METAP1P53582 386 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 POLR2LP62875 67 aaKnown RBP10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 PLPPR5Q32ZL2 321 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 STUMQ69YW2 141 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 BRICD5Q6PL45 260 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 UEVLDQ8IX04 471 aa10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 GPX7Q96SL4 187 aaPredicted RBP10.77□□□□□ -0.68
SLC28A1-203ENST00000394573 SPEGQ15772 3267 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 ZNF816-ZNF321PA0A0X1KG74 233 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 ADAM20O43506 726 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 ZP4Q12836 540 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 NRSN1Q8IZ57 195 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 OR52N5Q8NH56 324 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 C11orf1Q9H5F2 150 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 GPR27Q9NS67 375 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 SLC39A9Q9NUM3 307 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 TMEM38BQ9NVV0 291 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 PLPP3O14495 311 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 KITLGP21583 273 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 ANOS1P23352 680 aa10.77□□□□□ -0.69
SLC28A1-203ENST00000394573 OTX1P32242 354 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms