RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 OR8U9P0C7N5 309 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 CEACAM6P40199 344 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 CXorf66Q5JRM2 361 aaPredicted RBP12.67□□□□□ -0.38
GPC3-202ENST00000394299 BVESQ8NE79 360 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 DMBX1Q8NFW5 382 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 OR8U1Q8NH10 309 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 PHYHIPLQ96FC7 376 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 TMEM56Q96MV1 263 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 PLA2G2EQ9NZK7 142 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 RCL1Q9Y2P8 373 aaKnown RBP12.67□□□□□ -0.38
GPC3-202ENST00000394299 TMEM56-RWDD3S4R434 201 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 A0A0G2JNJ9 132 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 A0A0G2JRQ6 117 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 A8MXE2 369 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 C1QTNF9BB2RNN3 333 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 FBXO24O75426 580 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 CDS2O95674 445 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 FGF2P09038 288 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 OR3A1P47881 315 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 TDGF1P3P51864 188 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 RND3P61587 244 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 NHLH2Q02577 135 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 FAM185AQ8N0U4 392 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 OR10V1Q8NGI7 309 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 OR4D5Q8NGN0 318 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 LRRC29Q8WV35 223 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 COQ2Q96H96 371 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 ASF1BQ9NVP2 202 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 Q9UFV3 132 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 RNF150Q9ULK6 438 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 TMED3Q9Y3Q3 217 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 RBM7Q9Y580 266 aaKnown RBP12.67□□□□□ -0.38
GPC3-202ENST00000394299 PLCE1Q9P212 2302 aa12.67□□□□□ -0.38
GPC3-202ENST00000394299 TLN1Q9Y490 2541 aaKnown RBP12.66□□□□□ -0.38
GPC3-202ENST00000394299 A8MXK9 166 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 CRYAAP02489 173 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 FAM157CP0CG43 387 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 PSG2P11465 335 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 MDH2P40926 338 aaKnown RBP12.66□□□□□ -0.38
GPC3-202ENST00000394299 GLIPR1P48060 266 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
GPC3-202ENST00000394299 COL10A1Q03692 680 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 CMTM1Q8IZ96 169 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 TLNRD1Q9H1K6 362 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 MBNL3Q9NUK0 354 aaKnown RBP12.66□□□□□ -0.38
GPC3-202ENST00000394299 WIPI2Q9Y4P8 454 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 IGF2RP11717 2491 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 DIDO1Q9BTC0 2240 aaKnown RBP12.66□□□□□ -0.38
GPC3-202ENST00000394299 IGHV3OR15-7A0A075B7D8 119 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 SHOXO15266 292 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 SPRY3O43610 288 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 FAM87AP0C7U9 286 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 F2RP25116 425 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 AKR1C2P52895 323 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 AKR1C1Q04828 323 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 FAM201AQ5SY85 155 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 MRGPRDQ8TDS7 321 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 TAS2R3Q9NYW6 316 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 TREM2Q9NZC2 230 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 SPEF1Q9Y4P9 236 aa12.66□□□□□ -0.38
GPC3-202ENST00000394299 C12orf77C9JDV5 145 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 HEXAP06865 529 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 ZNF16P17020 682 aaPredicted RBP12.65□□□□□ -0.38
GPC3-202ENST00000394299 LMO1P25800 156 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 UCP1P25874 307 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 CCKARP32238 428 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 ARHGDIBP52566 201 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 GNMTQ14749 295 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 FAM169BQ8N8A8 192 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 RFESDQ8TAC1 157 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.38
GPC3-202ENST00000394299 SFXN3Q9BWM7 321 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 MS4A7Q9GZW8 240 aaPredicted RBP12.65□□□□□ -0.38
GPC3-202ENST00000394299 KCNS2Q9ULS6 477 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 E5RGE8 158 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.65□□□□□ -0.38
GPC3-202ENST00000394299 ST8SIA3O43173 380 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
GPC3-202ENST00000394299 EPHA1P21709 976 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 GABRA2P47869 451 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 HMGN3Q15651 99 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 SHEQ5VZ18 495 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 NSG2Q9Y328 171 aa12.65□□□□□ -0.38
GPC3-202ENST00000394299 FAM24AA6NFZ4 105 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 FGF16O43320 207 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 M6PRP20645 277 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 NKX6-1P78426 367 aaPredicted RBP12.64□□□□□ -0.39
GPC3-202ENST00000394299 FIP1L1Q6UN15 594 aaKnown RBP12.64□□□□□ -0.39
GPC3-202ENST00000394299 GFRALQ6UXV0 394 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 HSD17B13Q7Z5P4 300 aaPredicted RBP12.64□□□□□ -0.39
GPC3-202ENST00000394299 TMEM171Q8WVE6 324 aa12.64□□□□□ -0.39
GPC3-202ENST00000394299 OR2V2Q96R30 315 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms