RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CFAP47Q6ZTR5 3102 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 ASPMQ8IZT6 3477 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 TRAV39A0A0B4J263 110 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 PIGBOS1A0A0B4J2F0 54 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 IGHV3-64DA0A0J9YX35 117 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 ADAM20O43506 726 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 TIMM8AO60220 97 aaPredicted RBP7.63□□□□□ -1.19
TDP1-202ENST00000393452 APOC3P02656 99 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 S100GP29377 79 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 LPAR6P43657 344 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 ID3Q02535 119 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 PJVKQ0ZLH3 352 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 PXDC1Q5TGL8 231 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 WDR82Q6UXN9 313 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 ZNF826PQ6ZT77 177 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 BOLLQ8N9W6 283 aaKnown RBP7.63□□□□□ -1.19
TDP1-202ENST00000393452 LYPD6BQ8NI32 183 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 PRR7Q8TB68 274 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 IL1F10Q8WWZ1 152 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 SMIM3Q9BZL3 60 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 MS4A7Q9GZW8 240 aaPredicted RBP7.63□□□□□ -1.19
TDP1-202ENST00000393452 WASF3Q9UPY6 502 aa7.63□□□□□ -1.19
TDP1-202ENST00000393452 TMEM218A2RU14 115 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 TNFSF12O43508 249 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 SEC11BP0C7V7 166 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 SLC25A6P12236 298 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 TIMP3P35625 211 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 FABP6P51161 128 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 NHLH2Q02577 135 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 CLEC9AQ6UXN8 241 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 ACP7Q6ZNF0 438 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 OR2C3Q8N628 320 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 AKR1E2Q96JD6 320 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 GINS3Q9BRX5 216 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 USF3Q68DE3 2245 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 PTPRZ1P23471 2315 aaPredicted RBP7.62□□□□□ -1.19
TDP1-202ENST00000393452 BORCS7-ASMTA0A0B4J1R7 106 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 K7EM74 188 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 WNT9BO14905 357 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 KLK10O43240 276 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 PITX3O75364 302 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 FBXO24O75426 580 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 CRYABP02511 175 aaKnown RBP7.62□□□□□ -1.19
TDP1-202ENST00000393452 SPP1P10451 314 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 MMP9P14780 707 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 GCH1P30793 250 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 CEBPDP49716 269 aaPredicted RBP7.62□□□□□ -1.19
TDP1-202ENST00000393452 POLR2GP62487 172 aaKnown RBP eCLIP7.62□□□□□ -1.19
TDP1-202ENST00000393452 BLOC1S1P78537 153 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 C3orf36Q3SXR2 165 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 CXorf66Q5JRM2 361 aaPredicted RBP7.62□□□□□ -1.19
TDP1-202ENST00000393452 TIMM23BQ5SRD1 257 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 C10orf91Q5T1B1 145 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 SLC35E4Q6ICL7 350 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 ZNF474Q6S9Z5 364 aaPredicted RBP7.62□□□□□ -1.19
TDP1-202ENST00000393452 BTNL8Q6UX41 500 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 MSL2Q9HCI7 577 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 PARP11Q9NR21 331 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 LYRM2Q9NU23 88 aaPredicted RBP7.62□□□□□ -1.19
TDP1-202ENST00000393452 COQ3Q9NZJ6 369 aa7.62□□□□□ -1.19
TDP1-202ENST00000393452 ACACAQ13085 2346 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 TMEM30CPA0ZSE6 113 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 PROB1E7EW31 1015 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 IFNL4K9M1U5 179 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 ABCD4O14678 606 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 MED6O75586 246 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 PTBP3O95758 552 aaKnown RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 PVALBP20472 110 aaPredicted RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 CAV2P51636 162 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 EWSR1Q01844 656 aaKnown RBP eCLIP7.61□□□□□ -1.19
TDP1-202ENST00000393452 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 C1orf185Q5T7R7 199 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 PRAMEF6Q5VXH4 476 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 RPRMLQ8N4K4 120 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 SNIP1Q8TAD8 396 aaKnown RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 TOLLIPQ9H0E2 274 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 OR14J1Q9UGF5 321 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 FZR1Q9UM11 496 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 RNF115Q9Y4L5 304 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 A0A1B0GU03 582 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 A6NLC8 198 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 ATG12O94817 140 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 DANCRP0C864 163 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 PSG2P11465 335 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 ADCYAP1P18509 176 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 PAX5Q02548 391 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 MSMPQ1L6U9 139 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 KRTCAP3Q53RY4 240 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 ASCL5Q7RTU5 278 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 OR51H1Q8NH63 302 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 LSM10Q969L4 123 aaKnown RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 NARS2Q96I59 477 aaKnown RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 PARP12Q9H0J9 701 aaKnown RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 HRH4Q9H3N8 390 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 PLEKHF2Q9H8W4 249 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 FAM212BQ9NTI7 297 aaPredicted RBP7.61□□□□□ -1.19
TDP1-202ENST00000393452 SSUH2Q9Y2M2 353 aa7.61□□□□□ -1.19
TDP1-202ENST00000393452 SPENQ96T58 3664 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms