RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 KCNIP2Q9NS61 270 aa12.39□□□□□ -0.43
RTF1-201ENST00000389629 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 GCH1P30793 250 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 ARL3P36405 182 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 MEF2BQ02080 365 aaPredicted RBP12.38□□□□□ -0.43
RTF1-201ENST00000389629 BARX1Q9HBU1 254 aaPredicted RBP12.38□□□□□ -0.43
RTF1-201ENST00000389629 TUBD1Q9UJT1 453 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 PLAURQ03405 335 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 TMEM187Q14656 261 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 RASL10BQ96S79 203 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 RNASEKQ6P5S7 137 aaKnown RBP12.38□□□□□ -0.43
RTF1-201ENST00000389629 RFESDQ8TAC1 157 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 RBKSQ9H477 322 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
RTF1-201ENST00000389629 IGSF23A1L1A6 192 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 CXCL1P09341 107 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
RTF1-201ENST00000389629 TRAF3IP2O43734 574 aaPredicted RBP12.37□□□□□ -0.43
RTF1-201ENST00000389629 CBR3O75828 277 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 SUCLG1P53597 346 aaKnown RBP12.37□□□□□ -0.43
RTF1-201ENST00000389629 PRDX4Q13162 271 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 SPINT2O43291 252 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 COL10A1Q03692 680 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 RTN4RL2Q86UN3 420 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 MISP3Q96FF7 219 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 FAM166BA8MTA8 275 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 IGKV3-11P04433 115 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 SOD3P08294 240 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 HOXA6P31267 233 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 EIF3IQ13347 325 aaKnown RBP12.37□□□□□ -0.43
RTF1-201ENST00000389629 ELOBQ15370 118 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 RPRMQ9NS64 109 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 THBS3P49746 956 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 RTP5Q14D33 572 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 HLA-BQ31612 363 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 APH1AQ96BI3 265 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
RTF1-201ENST00000389629 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.37□□□□□ -0.43
RTF1-201ENST00000389629 IGHV1OR15-9A0A0B4J2B8 117 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 SNURFLB1AK76 121 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 SH2D1BO14796 132 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
RTF1-201ENST00000389629 CYB561P49447 251 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 SLC35B1P78383 322 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 LPAL2Q16609 132 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
RTF1-201ENST00000389629 CNEP1R1Q8N9A8 125 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 DIRC3C9JPN6 131 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 MUCL1Q96DR8 90 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 C14orf144Q96I85 54 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 NUDT16L1Q9BRJ7 211 aaKnown RBP12.36□□□□□ -0.43
RTF1-201ENST00000389629 STRADBQ9C0K7 418 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 SCTP09683 121 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 ACSM6Q6P461 480 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.36□□□□□ -0.43
RTF1-201ENST00000389629 MANBALQ9NQG1 85 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 OR10J4P0C629 311 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 EGR1P18146 543 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 BCL3P20749 454 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 GPR12P47775 334 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 SELENOVP59797 346 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 LINC00696Q6ZRV3 163 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 D2HGDHQ8N465 521 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 OR5D13Q8NGL4 314 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 NDUFAF3Q9BU61 184 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 RTL8AQ9BWD3 113 aa12.36□□□□□ -0.43
RTF1-201ENST00000389629 CCL7P80098 99 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.35□□□□□ -0.43
RTF1-201ENST00000389629 TMEM211Q6ICI0 200 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
RTF1-201ENST00000389629 SLC25A47Q6Q0C1 308 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 OR2M3Q8NG83 312 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 OR1L6Q8NGR2 347 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 TRPM7Q96QT4 1865 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 IGHMP01871 453 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
RTF1-201ENST00000389629 RFNGQ9Y644 331 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 TIMM8AO60220 97 aaPredicted RBP12.35□□□□□ -0.43
RTF1-201ENST00000389629 CD82P27701 267 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 ZNF506Q5JVG8 444 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 RBMXL3Q8N7X1 1067 aaKnown RBP12.35□□□□□ -0.43
RTF1-201ENST00000389629 ACY3Q96HD9 319 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 WNT16Q9UBV4 365 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 NDUFB4O95168 129 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 STARD6P59095 220 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 GALMQ96C23 342 aa12.35□□□□□ -0.43
RTF1-201ENST00000389629 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms