RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 EPB41P11171 864 aaKnown RBP-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 MIFP14174 115 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 LBPP18428 481 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 COX5AP20674 150 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CALB2P22676 271 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TNFSF4P23510 183 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 RND2P52198 227 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TPI1P60174 286 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 HIST1H4AP62805 103 aaKnown RBP-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 MMDQ15546 238 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PDK4Q16654 411 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ATG16L1Q676U5 607 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TMEM215Q68D42 235 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 OR52E8Q6IFG1 317 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ZYG11AQ6WRX3 759 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 C12orf54Q6X4T0 127 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 DPPA2Q7Z7J5 298 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 C10orf67Q8IYJ2 551 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 KRTCAP2Q8N6L1 136 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 C5orf56Q8N8D9 126 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 FNDC5Q8NAU1 212 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 OR10R2Q8NGX6 335 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 OR5K2Q8NHB8 316 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 SMIM11BQ8TCY0 68 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 UFD1Q92890 307 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 MGLLQ99685 303 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CHID1Q9BWS9 393 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 RTFDC1Q9BY42 306 aaPredicted RBP-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 OR8D2Q9GZM6 311 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ACTR8Q9H981 624 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 BAIAP2Q9UQB8 552 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TP53TG1Q9Y2A0 90 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 NOS1P29475 1434 aa-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ZCCHC11Q5TAX3 1644 aaKnown RBP-3.56□□□□□ -2.98
RNU6-1340P-201ENST00000384438 A0A0A6YYD5 115 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 IGHV6-1A0A0B4J1U7 121 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TRAV38-1A0A0B4J264 116 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 NBDYA0A0U1RRE5 68 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TRDCB7Z8K6 153 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 APOC4-APOC2K7ER74 178 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 SULT1C2O00338 296 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 SLC16A4O15374 487 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 FGFR1OPO95684 399 aaKnown RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TCL1BO95988 128 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TRBV12-3P01733 135 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 EIF2S1P05198 315 aaKnown RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CALM1P0DP23 149 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CALM2P0DP24 149 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CALM3P0DP25 149 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CD79AP11912 226 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 GRK6P43250 576 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 SSR2P43308 183 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 BDKRB1P46663 353 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TNFSF10P50591 281 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 RAB9AP51151 201 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 STX3Q13277 289 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ACSM3Q53FZ2 586 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 LELP1Q5T871 98 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 C12orf60Q5U649 245 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 SLC25A48Q6ZT89 311 aaKnown RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CAMKMTQ7Z624 323 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CCDC50Q8IVM0 306 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 LRRC34Q8IZ02 419 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 NFKBIDQ8NI38 313 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ORAOV1Q8WV07 137 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CTTNBP2Q8WZ74 1663 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 MRRFQ96E11 262 aaKnown RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 HOOK2Q96ED9 719 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 LTV1Q96GA3 475 aaPredicted RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 LINC01600Q96MT4 127 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 RARRES2Q99969 163 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PCDH11XQ9BZA7 1347 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PRRG3Q9BZD7 231 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TSGA10Q9BZW7 698 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PIGUQ9H490 435 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 RIBC2Q9H4K1 309 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TMEM138Q9NPI0 162 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PXMP2Q9NR77 195 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 KCNIP2Q9NS61 270 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TAS2R7Q9NYW3 318 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TBL2Q9Y4P3 447 aaKnown RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TIMM9Q9Y5J7 89 aa-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CHCHD2Q9Y6H1 151 aaPredicted RBP-3.57□□□□□ -2.98
RNU6-1340P-201ENST00000384438 CICQ96RK0 1608 aaPredicted RBP-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PHLPP2Q6ZVD8 1323 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 LINC00959A0A1B0GUT2 108 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 MAGEB16A2A368 324 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 H3BRM9 83 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 BCE1O60756 84 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 RDH16O75452 317 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 EIF3GO75821 320 aaKnown RBP eCLIP-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 PPBPP02775 128 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 APODP05090 189 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 IL6P05231 212 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 SPP1P10451 314 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 POLR2EP19388 210 aaKnown RBP-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 TAS2R46P59540 309 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 ACTR1AP61163 376 aa-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 GRB2P62993 217 aaKnown RBP-3.58□□□□□ -2.98
RNU6-1340P-201ENST00000384438 GOLGA8DPQ0D2H9 430 aa-3.58□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms