RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDGFB-202ENST00000381551 OR52W1Q6IF63 320 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 CNIH2Q6PI25 160 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 BAIAP2L2Q6UXY1 529 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 MOB1BQ7L9L4 216 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 OR1L1Q8NH94 360 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 NUDCD2Q8WVJ2 157 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 EXTL2Q9UBQ6 330 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 ADAM30Q9UKF2 790 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 CDC42EP3Q9UKI2 254 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 MGAT4AQ9UM21 535 aa12.63□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 A0A087X0M5 115 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 TRAV40A0A0B4J280 105 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV1-69DA0A0B4J2H0 117 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 A0A1B0GX30 115 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 TRDCB7Z8K6 153 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 SPINT2O43291 252 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
PDGFB-202ENST00000381551 DTYMKP23919 212 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 UBE2E1P51965 193 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 LOXL3P58215 753 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 KLRD1Q13241 179 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 UTF1Q5T230 341 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 GPR157Q5UAW9 335 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 Q6ZS49 121 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 PDZD9Q8IXQ8 264 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 PRR18Q8N4B5 295 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 OR11H6Q8NGC7 330 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 OR13D1Q8NGV5 346 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 DIRAS2Q96HU8 199 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 OCSTAMPQ9BR26 566 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 ST6GALNAC5Q9BVH7 336 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 SUCNR1Q9BXA5 334 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 RAB9BQ9NP90 201 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 NUP50Q9UKX7 468 aa12.62□□□□□ -0.39
PDGFB-202ENST00000381551 NSD1Q96L73 2696 aaPredicted RBP12.62□□□□□ -0.39
PDGFB-202ENST00000381551 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
PDGFB-202ENST00000381551 MXRA5Q9NR99 2828 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 MEIOCA2RUB1 952 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 CRLF1O75462 422 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 SCTP09683 121 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 COX7A1P24310 79 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 NFYBP25208 207 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 PRSS3P35030 304 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 SRP14P37108 136 aaKnown RBP12.61□□□□□ -0.39
PDGFB-202ENST00000381551 BPIFB3P59826 476 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 HTD2P86397 168 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 MADCAM1Q13477 382 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 LTC4SQ16873 150 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 CHRFAM7AQ494W8 412 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 PNKDQ8N490 385 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 GALMQ96C23 342 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 ABHD1Q96SE0 405 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 SOSTQ9BQB4 213 aa12.61□□□□□ -0.39
PDGFB-202ENST00000381551 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV2-26A0A0B4J1V2 119 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 SDCBPO00560 298 aaPredicted RBP12.6□□□□□ -0.39
PDGFB-202ENST00000381551 GSTT2P0CG29 244 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 GSTT2BP0CG30 244 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 CD34P28906 385 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 HLA-DRB3P79483 266 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
PDGFB-202ENST00000381551 BRD3OSQ6XYD6 125 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 SNX29P2Q8IUI4 249 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 ABHD12Q8N2K0 398 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 GCDHQ92947 438 aaPredicted RBP12.6□□□□□ -0.39
PDGFB-202ENST00000381551 CLEC7AQ9BXN2 247 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 ZNF286AQ9HBT8 521 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 ZNF69Q9UC07 566 aa12.6□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV3-43A0A0B4J1X8 118 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 IGKV1-6A0A0C4DH72 117 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 A0A1W2PRD5 423 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 A0A1W2PRF3 423 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 A0A1W2PRM7 423 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 FAM172BPA6NC97 362 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 FABP7O15540 132 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 IGHV3-43DP0DP04 118 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 S100A5P33763 92 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 CBX5P45973 191 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 KIR2DS1Q14954 304 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 KRTAP21-3Q3LHN1 58 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 TMEM30BQ3MIR4 351 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 RUSC1-AS1Q66K80 236 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 HOGA1Q86XE5 327 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
PDGFB-202ENST00000381551 OR52L2PQ8NGH6 319 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms