RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TRDCB7Z8K6 153 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 IL18BPO95998 194 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 BSXQ3C1V8 233 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 ZNF737O75373 536 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 TK1P04183 234 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 SERPINE2P07093 398 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 TDGF1P13385 188 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 GZMHP20718 246 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 MS4A10Q96PG2 267 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 Q9N2K0 584 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 DCHS1Q96JQ0 3298 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 ZNF320A2RRD8 509 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 GRIFINA4D1Z8 144 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 TCF21O43680 179 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 LMO1P25800 156 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 TAS2R30P59541 319 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 GRB2P62993 217 aaKnown RBP11.91□□□□□ -0.5
SDC1-202ENST00000381150 TMEM241Q24JQ0 296 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 OR2M3Q8NG83 312 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 ZNF845Q96IR2 970 aaPredicted RBP11.91□□□□□ -0.5
SDC1-202ENST00000381150 RASL10BQ96S79 203 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 SDF2L1Q9HCN8 221 aa11.91□□□□□ -0.5
SDC1-202ENST00000381150 A0A1B0GWJ7 208 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 MKRN2OSH3BPM6 223 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 SFTPCP11686 197 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 CEACAM1P13688 526 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 ZNF92Q03936 586 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 TMEM41BQ5BJD5 291 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 PLCXD3Q63HM9 321 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 GJC3Q8NFK1 279 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 GATAD1Q8WUU5 269 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 ATP5SQ99766 215 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 PARD6AQ9NPB6 346 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 TRAV39A0A0B4J263 110 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 UBE2L5PA0A1B0GUS4 154 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 PDGFBP01127 241 aaPredicted RBP11.9□□□□□ -0.5
SDC1-202ENST00000381150 SCTP09683 121 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 NUBP1P53384 320 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 FAM78BQ5VT40 261 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 SLC25A26Q70HW3 274 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 SSX7Q7RTT5 188 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 OSR2Q8N2R0 312 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 ZNF837Q96EG3 531 aaPredicted RBP11.9□□□□□ -0.5
SDC1-202ENST00000381150 PPIAL4AQ9Y536 164 aa11.9□□□□□ -0.5
SDC1-202ENST00000381150 CHCHD2Q9Y6H1 151 aaPredicted RBP11.9□□□□□ -0.5
SDC1-202ENST00000381150 B4DEV8 164 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 RBMXL2O75526 392 aaKnown RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 CD81P60033 236 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 FADS6Q8N9I5 356 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 CDX2Q99626 313 aaPredicted RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 OR51I2Q9H344 312 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 LOC102723996A0A087X1L8 192 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 OR3A1P47881 315 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 UBE2G2P60604 165 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 PNRC1Q12796 327 aaPredicted RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 PCOLCEQ15113 449 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 ADPRHL1Q8NDY3 354 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 PP6455Q8WZ26 134 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 SPACA9Q96E40 222 aaPredicted RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 FAM103A1Q9BTL3 118 aaKnown RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 TMEM222Q9H0R3 208 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 OPN3Q9H1Y3 402 aaPredicted RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 NPIPA2E9PIF3 369 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 NPIPA3F8WFD2 350 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 MSR1P21757 451 aa11.89□□□□□ -0.51
SDC1-202ENST00000381150 RCC1LQ96I51 464 aaKnown RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 ZNF385AQ96PM9 386 aaKnown RBP11.89□□□□□ -0.51
SDC1-202ENST00000381150 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 TRAF3IP2O43734 574 aaPredicted RBP11.88□□□□□ -0.51
SDC1-202ENST00000381150 CDS2O95674 445 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 IGHV3-9P01782 118 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 CRYAAP02489 173 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 NPBWR2P48146 333 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 IGKV1-27A0A075B6S5 117 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 IGHV3-64DA0A0J9YX35 117 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 GCGP01275 180 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 IFNA1P01562 189 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 RPLP1P05386 114 aaKnown RBP11.88□□□□□ -0.51
SDC1-202ENST00000381150 CELA2AP08217 269 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 CYC1P08574 325 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 TCN2P20062 427 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 RAET1LQ5VY80 246 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 ZNF774Q6NX45 483 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
SDC1-202ENST00000381150 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
SDC1-202ENST00000381150 MAFAQ8NHW3 353 aaPredicted RBP11.88□□□□□ -0.51
SDC1-202ENST00000381150 SPTSSAQ969W0 71 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 MOB3AQ96BX8 217 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 UCN2Q96RP3 112 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 ULBP2Q9BZM5 246 aa11.88□□□□□ -0.51
SDC1-202ENST00000381150 WDR54Q9H977 334 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms