RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 NKX2-6A6NCS4 301 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
GABPB1-203ENST00000380877 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 C1QL2Q7Z5L3 287 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 SAXO1Q8IYX7 474 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 C19orf12Q9NSK7 152 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 CHST1O43916 411 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 F2RP25116 425 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 UNC119Q13432 240 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 ZBTB34Q8NCN2 500 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OR4F5Q8NH21 305 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 CHAC2Q8WUX2 184 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OR4F4Q96R69 305 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 NKX6-2Q9C056 277 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF727A8MUV8 499 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 FGF2P09038 288 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 NUDT16L1Q9BRJ7 211 aaKnown RBP10.54□□□□□ -0.72
GABPB1-203ENST00000380877 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OPN1MWP04001 364 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OPN1MW2P0DN77 364 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OPN1MW3P0DN78 364 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 DCAF12L2Q5VW00 463 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OR8B3Q8NGG8 313 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 RPUSD4Q96CM3 377 aaKnown RBP10.54□□□□□ -0.72
GABPB1-203ENST00000380877 OR8B2Q96RD0 313 aa10.54□□□□□ -0.72
GABPB1-203ENST00000380877 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 NCBP2LA6PVI3 153 aaKnown RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 MFNGO00587 321 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 FAM87AP0C7U9 286 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 MIDNQ504T8 468 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 DIRC2Q96SL1 478 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 CCL13Q99616 98 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 HSD17B10Q99714 261 aaKnown RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 GNB4Q9HAV0 340 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 Q9N2K0 584 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 PPP1R14DQ9NXH3 145 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 URGCP-MRPS24S4R325 110 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 V9GYS6 101 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 PLXNA2O75051 1894 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 PTGDSP41222 190 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 CLEC9AQ6UXN8 241 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 BCL2L2Q92843 193 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 UBTD1Q9HAC8 227 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 SNRNP200O75643 2136 aaKnown RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 OR4A8P0C604 315 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 RCC1P18754 421 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 OR10Z1Q8NGY1 313 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 CLDN14O95500 239 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 CEACAM3P40198 252 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 P2RY1P47900 373 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 Q0VFX4 171 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 IL24Q13007 206 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 ACSF3Q4G176 576 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 TIMM23BQ5SRD1 257 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 PFDN5Q99471 154 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 HES4Q9HCC6 221 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 FKBP11Q9NYL4 201 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 SLC25A10Q9UBX3 287 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-203ENST00000380877 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
GABPB1-203ENST00000380877 HBZP02008 142 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 CECR9P0C854 216 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 PSG2P11465 335 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 SLC25A4P12235 298 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 BPIFB3P59826 476 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 LYPD8Q6UX82 237 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 C15orf54Q8N8G6 183 aa10.52□□□□□ -0.72
GABPB1-203ENST00000380877 A0A1W2PRD5 423 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 A0A1W2PRF3 423 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 A0A1W2PRM7 423 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 MPV17P39210 176 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 CEBPDP49716 269 aaPredicted RBP10.52□□□□□ -0.73
GABPB1-203ENST00000380877 TAGLNQ01995 201 aaKnown RBP10.52□□□□□ -0.73
GABPB1-203ENST00000380877 NAAAQ02083 359 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 C14orf79Q96F83 325 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 C1QTNF5Q9BXJ0 243 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
GABPB1-203ENST00000380877 C9orf106Q8NAJ2 232 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 LRFN3Q9BTN0 628 aa10.52□□□□□ -0.73
GABPB1-203ENST00000380877 H7BYZ3 331 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 PJVKQ0ZLH3 352 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 COMMD1Q8N668 190 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 ZIC4Q8N9L1 334 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 VSTM2AQ8TAG5 236 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 OR5P3Q8WZ94 311 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 CISD1Q9NZ45 108 aaKnown RBP10.51□□□□□ -0.73
GABPB1-203ENST00000380877 LY6G6EA0A0G2JKS1 128 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 GYPAP02724 150 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 NQO2P16083 231 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 CD200P41217 278 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 FAM27E3Q08E93 113 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 TGIF2LYQ8IUE0 185 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 NEIL1Q96FI4 390 aaPredicted RBP10.51□□□□□ -0.73
GABPB1-203ENST00000380877 SMIM7Q9BQ49 75 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
GABPB1-203ENST00000380877 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
GABPB1-203ENST00000380877 U3KQA8 63 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms