RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MTCH1Q9NZJ7 389 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 KIAA1456Q9P272 454 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 ZMAT5Q9UDW3 170 aaKnown RBP13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 PRSS50Q9UI38 385 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 WSB1Q9Y6I7 421 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 PCBD1P61457 104 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 PYY3Q5JQD4 70 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 C9orf152Q5JTZ5 239 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 ALKBH2Q6NS38 261 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 DDA1Q9BW61 102 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 DOK5Q9P104 306 aa13.88□□□□□ -0.19
NKX3-1-201ENST00000380871 TRAV39A0A0B4J263 110 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 CLDN18P56856 261 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 ARG2P78540 354 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 PRDX4Q13162 271 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 MRPL21Q7Z2W9 205 aaKnown RBP13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF295-AS1Q8N0V1 137 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 SYNGR1O43759 233 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 NAPSAO96009 420 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 APH1AQ96BI3 265 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 RSG1Q9BU20 258 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 TOLLIPQ9H0E2 274 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 TMPRSS5Q9H3S3 457 aa13.87□□□□□ -0.19
NKX3-1-201ENST00000380871 SRPXP78539 464 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 ID3Q02535 119 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 TLE1Q04724 770 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 AKR1C8PQ5T2L2 129 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 DBX2Q6ZNG2 339 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 THNSL2Q86YJ6 484 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 CMTM1Q8IZ96 169 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 GCNT2Q8N0V5 402 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 CLDND2Q8NHS1 167 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 UBALD1Q8TB05 177 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 SLC25A31Q9H0C2 315 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 VSIRQ9H7M9 311 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 PLSCR2Q9NRY7 297 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 GNG13Q9P2W3 67 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 RNF115Q9Y4L5 304 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 SPAARA0A1B0GVQ0 90 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 WRBO00258 174 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 HS3ST1O14792 307 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 DNPH1O43598 174 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 S100PP25815 95 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 MAS1LP35410 378 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 CCL11P51671 97 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 RPL23AP62750 156 aaKnown RBP13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 FAM180AQ6UWF9 173 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 CYB5BO43169 146 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 HSPA12AO43301 675 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 LILRA1O75019 489 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 VDAC1P21796 283 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 HNF4GQ14541 408 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 SP5Q6BEB4 398 aaPredicted RBP13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 C1QL4Q86Z23 238 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 SPIN2AQ99865 258 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 SPIN2BQ9BPZ2 258 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 C1QTNF5Q9BXJ0 243 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF552Q9H707 407 aaPredicted RBP13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 TMEM9BQ9NQ34 198 aa13.86□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF732B4DXR9 585 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 HOXA5P20719 270 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 UCP1P25874 307 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 FGF8P55075 233 aaPredicted RBP13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 MPV17LQ2QL34 196 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 RDH5Q92781 318 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 CHD3Q12873 2000 aaKnown RBP13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 PGLYRP1O75594 196 aaPredicted RBP13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 SLC34A2O95436 690 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 TRGC2P03986 189 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 Q6ZRM9 215 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 FAM185AQ8N0U4 392 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 FAM86C1Q9NVL1 165 aa13.85□□□□□ -0.19
NKX3-1-201ENST00000380871 ZFP92A6NM28 416 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BKO60814 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 WISP2O76076 250 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BJP06899 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 SP1P08047 785 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BOP23527 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BBP33778 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BDP58876 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BCP62807 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 SLC10A1Q14973 349 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST2H2BEQ16778 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 SSX7Q7RTT5 188 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 DEFB124Q8NES8 71 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BHQ93079 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 SPSB4Q96A44 273 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BNQ99877 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 HIST1H2BMQ99879 126 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 NDUFS6O75380 124 aaKnown RBP13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF883P0CG24 379 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 PSG2P11465 335 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 RAB2AP61019 212 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 IL1F10Q8WWZ1 152 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 ATP5SQ99766 215 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 NIPSNAP3BQ9BS92 247 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 GPR87Q9BY21 358 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF665Q9H7R5 613 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms