RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-201ENST00000380829 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 ANXA10Q9UJ72 324 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 POMT1Q9Y6A1 747 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 ANKRD30BLA7E2S9 258 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 CEACAM18A8MTB9 384 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 PDCD6O75340 191 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 C1QL1O75973 258 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 TAS2R31P59538 309 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 EIF5AL1Q6IS14 154 aaKnown RBP12.18□□□□□ -0.46
CLCN4-201ENST00000380829 Q6ZT83 130 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 PEG10Q86TG7 708 aaKnown RBP12.18□□□□□ -0.46
CLCN4-201ENST00000380829 ZNF2Q9BSG1 426 aaPredicted RBP12.18□□□□□ -0.46
CLCN4-201ENST00000380829 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 LUZP4Q9P127 313 aa12.18□□□□□ -0.46
CLCN4-201ENST00000380829 DMXL2Q8TDJ6 3036 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 K7EM74 188 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 SYNGR1O43759 233 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
CLCN4-201ENST00000380829 HIST3H2BBQ8N257 126 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 ZNF610Q8N9Z0 462 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 OR5L1Q8NGL2 311 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 MRPL37Q9BZE1 423 aaKnown RBP12.17□□□□□ -0.46
CLCN4-201ENST00000380829 ZNF442Q9H7R0 627 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 FBXL17Q9UF56 701 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 EREGO14944 169 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 HKR1P10072 659 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 CA6P23280 308 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 CYCSP99999 105 aaKnown RBP12.17□□□□□ -0.46
CLCN4-201ENST00000380829 GABRA6Q16445 453 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 ANKRD55Q3KP44 614 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 GALNT14Q96FL9 552 aa12.17□□□□□ -0.46
CLCN4-201ENST00000380829 METTL8Q9H825 291 aaKnown RBP12.17□□□□□ -0.46
CLCN4-201ENST00000380829 SEC14L6B5MCN3 397 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 PPP1R2P9O14990 202 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 KNG1P01042 644 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 OR5H8P0DN80 308 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 LYL1P12980 280 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 FUT3P21217 361 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
CLCN4-201ENST00000380829 Q6ZPA2 131 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 OR5A2Q8NGI9 324 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 LYPD6BQ8NI32 183 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 Q8WTZ3 238 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 ZNF488Q96MN9 340 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 OR2J1Q9GZK6 312 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 LIME1Q9H400 295 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 TP53TG5Q9Y2B4 290 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 CEP295Q9C0D2 2601 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 SMPD2O60906 423 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 AGFG2O95081 481 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 IFNA10P01566 189 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 DTYMKP23919 212 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 DUSP1P28562 367 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 MUCL1Q96DR8 90 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 SCGB3A2Q96PL1 93 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 CDH20Q9HBT6 801 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 KCNJ16Q9NPI9 418 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 DKK4Q9UBT3 224 aa12.16□□□□□ -0.46
CLCN4-201ENST00000380829 HSPB6O14558 160 aa12.15□□□□□ -0.46
CLCN4-201ENST00000380829 RRP8O43159 456 aaKnown RBP12.15□□□□□ -0.46
CLCN4-201ENST00000380829 SFT2D2O95562 160 aa12.15□□□□□ -0.46
CLCN4-201ENST00000380829 NUTF2P61970 127 aaKnown RBP12.15□□□□□ -0.46
CLCN4-201ENST00000380829 SLC22A25Q6T423 547 aa12.15□□□□□ -0.46
CLCN4-201ENST00000380829 IGFL3Q6UXB1 125 aa12.15□□□□□ -0.46
CLCN4-201ENST00000380829 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 OR5H1A6NKK0 313 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 MAS1LP35410 378 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 CEBPGP53567 150 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 FGF12P61328 243 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 PPP1CBP62140 327 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.47
CLCN4-201ENST00000380829 Q8NFD4 153 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 SNIP1Q8TAD8 396 aaKnown RBP12.15□□□□□ -0.47
CLCN4-201ENST00000380829 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.47
CLCN4-201ENST00000380829 NECAP2Q9NVZ3 263 aa12.15□□□□□ -0.47
CLCN4-201ENST00000380829 ATMQ13315 3056 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 PHOX2AO14813 284 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 SOX15O60248 233 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 TRGC2P03986 189 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 BPIFB3P59826 476 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
CLCN4-201ENST00000380829 NKX6-1P78426 367 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-201ENST00000380829 MRPL49Q13405 166 aaKnown RBP12.14□□□□□ -0.47
CLCN4-201ENST00000380829 MKXQ8IYA7 352 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 OPN3Q9H1Y3 402 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-201ENST00000380829 DNAJB11Q9UBS4 358 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 MPC1Q9Y5U8 109 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 PRR14LQ5THK1 2151 aa12.14□□□□□ -0.47
CLCN4-201ENST00000380829 MAP1BP46821 2468 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms