RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 hCG_1809904A0A1W2PP81 198 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 A0A1W2PPE2 198 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 A0A1W2PR64 198 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 A0A1W2PRV1 198 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 HLA-DRB3P79483 266 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 SRSF7Q16629 238 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMN2-202ENST00000380742 LTC4SQ16873 150 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 UTF1Q5T230 341 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 PYHIN1Q6K0P9 492 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 Q71RC1 249 aaPredicted RBP15.37■□□□□ 0.05
SMN2-202ENST00000380742 GPX8Q8TED1 209 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 MGAT4AQ9UM21 535 aa15.37■□□□□ 0.05
SMN2-202ENST00000380742 TRDCB7Z8K6 153 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 F2RL2O00254 374 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 SPINT2O43291 252 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 SCTP09683 121 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 ETV6P41212 452 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 KLRD1Q13241 179 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 RNASE12Q5GAN4 147 aaKnown RBP15.36■□□□□ 0.05
SMN2-202ENST00000380742 HCP5Q6MZN7 132 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 FAM53AQ6NSI3 398 aaPredicted RBP15.36■□□□□ 0.05
SMN2-202ENST00000380742 FAM131AQ6UXB0 335 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 Q6ZS49 121 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 C15orf40Q8WUR7 153 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 SCPEP1Q9HB40 452 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 RABL2AQ9UBK7 228 aaPredicted RBP15.36■□□□□ 0.05
SMN2-202ENST00000380742 RABL2BQ9UNT1 228 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 SESN1Q9Y6P5 492 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 FAM172BPA6NC97 362 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 RNASEK-C17orf49H0YIS7 233 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 SULT1C2O00338 296 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 FCER2P06734 321 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 LPLP06858 475 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 GSTT2P0CG29 244 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 GSTT2BP0CG30 244 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 HOXB4P17483 251 aaPredicted RBP15.36■□□□□ 0.05
SMN2-202ENST00000380742 FPR2P25090 351 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 NFYBP25208 207 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 CBX5P45973 191 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 LOXL3P58215 753 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 KLF17Q5JT82 389 aaPredicted RBP15.36■□□□□ 0.05
SMN2-202ENST00000380742 FAM120AOSQ5T036 256 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 HOGA1Q86XE5 327 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 OR10A7Q8NGE5 316 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 OR52I2Q8NH67 350 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 LHX4Q969G2 390 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 SUCNR1Q9BXA5 334 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 ZNF286AQ9HBT8 521 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 ANAPC10Q9UM13 185 aa15.36■□□□□ 0.05
SMN2-202ENST00000380742 IGHV3-43A0A0B4J1X8 118 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 IGKV1-6A0A0C4DH72 117 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 CTDSPLO15194 276 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 FABP7O15540 132 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 IGHV3-43DP0DP04 118 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 DGCR2P98153 550 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 ZNF79Q15937 498 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 SPANXN2Q5MJ10 180 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 IL17RELQ6ZVW7 336 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 PDZD9Q8IXQ8 264 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 SNAPC3Q92966 411 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 TMEM133Q9H2Q1 129 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 RAB9BQ9NP90 201 aa15.35■□□□□ 0.05
SMN2-202ENST00000380742 TRAV40A0A0B4J280 105 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 CENPVL3A0A0U1RRI6 287 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 GABARAPH6UMI1 98 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 SDCBPO00560 298 aaPredicted RBP15.34■□□□□ 0.05
SMN2-202ENST00000380742 FSHBP01225 129 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 IGHV4-38-2P0DP08 117 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 COX7A1P24310 79 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 KIR2DS4P43632 304 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 KIR2DS1Q14954 304 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 HERPUD1Q15011 391 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 IGSF11Q5DX21 431 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 OR52W1Q6IF63 320 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 LINC00299Q6ZSB3 139 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 BEST4Q8NFU0 473 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 OR52L2PQ8NGH6 319 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 OR52M1Q8NGK5 317 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 OR4A4PQ8NGN8 299 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 FCAMRQ8WWV6 532 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 IL1F10Q8WWZ1 152 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 LEAP2Q969E1 77 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 GALMQ96C23 342 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 IFT46Q9NQC8 304 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 TMEM160Q9NX00 188 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 GFOD1Q9NXC2 390 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 KLK11Q9UBX7 282 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 ANXA10Q9UJ72 324 aa15.34■□□□□ 0.05
SMN2-202ENST00000380742 IGHV3OR16-10A0A075B7F0 116 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 A0A087X0M5 115 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 A0A1B0GX30 115 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 IGHV3-7P01780 117 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 NAT1P18440 290 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 PTBP1P26599 531 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMN2-202ENST00000380742 MRPS10P82664 201 aaKnown RBP15.33■□□□□ 0.04
SMN2-202ENST00000380742 HTD2P86397 168 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 GNMTQ14749 295 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 NCR3LG1Q68D85 454 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 PNKDQ8N490 385 aa15.33■□□□□ 0.04
SMN2-202ENST00000380742 SMIM4Q8WVI0 70 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms