RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TAS2R3Q9NYW6 316 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 ERRFI1Q9UJM3 462 aaPredicted RBP19.51■□□□□ 0.71
VPS16-201ENST00000380443 DSPP15924 2871 aaKnown RBP19.51■□□□□ 0.71
VPS16-201ENST00000380443 GTF3C1Q12789 2109 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 TEX46H3BTG2 121 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 MMP9P14780 707 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 PVALBP20472 110 aaPredicted RBP19.51■□□□□ 0.71
VPS16-201ENST00000380443 SMIM21Q3B7S5 101 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 WDR82Q6UXN9 313 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 OR10Z1Q8NGY1 313 aa19.51■□□□□ 0.71
VPS16-201ENST00000380443 EPG5Q9HCE0 2579 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 PTBP3O95758 552 aaKnown RBP19.5■□□□□ 0.71
VPS16-201ENST00000380443 SLC25A6P12236 298 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 CD200P41217 278 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 TMEM33P57088 247 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 Q6ZR03 302 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 FAM90A1Q86YD7 464 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 UBAC2Q8NBM4 344 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 OR52M1Q8NGK5 317 aa19.5■□□□□ 0.71
VPS16-201ENST00000380443 A6NLC8 198 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 CRYAAP02489 173 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 HEXAP06865 529 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 GLI4P10075 376 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 PAX5Q02548 391 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 C5orf24Q7Z6I8 188 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 TMED6Q8WW62 240 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 FBXL17Q9UF56 701 aa19.49■□□□□ 0.71
VPS16-201ENST00000380443 INTS1Q8N201 2190 aaKnown RBP19.49■□□□□ 0.71
VPS16-201ENST00000380443 BORCS7-ASMTA0A0B4J1R7 106 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 NKX2-6A6NCS4 301 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 FAM157CP0CG43 387 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 GLRXP35754 106 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 CFHR2P36980 270 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 NKX2-1P43699 371 aaPredicted RBP19.48■□□□□ 0.71
VPS16-201ENST00000380443 NMSQ5H8A3 153 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 RPL7L1Q6DKI1 246 aaKnown RBP19.48■□□□□ 0.71
VPS16-201ENST00000380443 S100PBPQ96BU1 408 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 LINC00052Q96N35 136 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 OR2S2Q9NQN1 319 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 K7EM74 188 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 HSPA12AO43301 675 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 IGHV3-13P01766 116 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 RPS23P62266 143 aaKnown RBP19.48■□□□□ 0.71
VPS16-201ENST00000380443 ZBTB34Q8NCN2 500 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 IL1F10Q8WWZ1 152 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 ARL11Q969Q4 196 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 TOLLIPQ9H0E2 274 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 ARV1Q9H2C2 271 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 OR14J1Q9UGF5 321 aa19.48■□□□□ 0.71
VPS16-201ENST00000380443 PKD1L2Q7Z442 2459 aa19.47■□□□□ 0.71
VPS16-201ENST00000380443 OOEPA6NGQ2 149 aa19.47■□□□□ 0.71
VPS16-201ENST00000380443 TESK1Q15569 626 aa19.47■□□□□ 0.71
VPS16-201ENST00000380443 MSMO1Q15800 293 aa19.47■□□□□ 0.71
VPS16-201ENST00000380443 LPAR3Q9UBY5 353 aa19.47■□□□□ 0.71
VPS16-201ENST00000380443 ZNF83P51522 516 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 BLOC1S1P78537 153 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 TRAT1Q6PIZ9 186 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 SSX8Q7RTT4 187 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 GALNT11Q8NCW6 608 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 DMBX1Q8NFW5 382 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 C11orf1Q9H5F2 150 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 OR1A1Q9P1Q5 309 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 RCL1Q9Y2P8 373 aaKnown RBP19.46■□□□□ 0.71
VPS16-201ENST00000380443 PTPRQQ9UMZ3 2332 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 RNF212BA8MTL3 300 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 M0R1B8 84 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 PRRG2O14669 202 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 SERPINE2P07093 398 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 PRAMEF6Q5VXH4 476 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 IL34Q6ZMJ4 242 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 ZNF826PQ6ZT77 177 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 GALMQ96C23 342 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 SMIM8Q96KF7 97 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 MSL2Q9HCI7 577 aa19.46■□□□□ 0.71
VPS16-201ENST00000380443 LOC400499M0QZD8 3231 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 A0A1B0GU03 582 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 SULT1A2P50226 295 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 NKX6-1P78426 367 aaPredicted RBP19.45■□□□□ 0.7
VPS16-201ENST00000380443 OR1S2Q8NGQ3 325 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 LSM10Q969L4 123 aaKnown RBP19.45■□□□□ 0.7
VPS16-201ENST00000380443 SLC25A31Q9H0C2 315 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 NARFLQ9H6Q4 476 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 PLEKHF2Q9H8W4 249 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 MMP26Q9NRE1 261 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 LIN7CQ9NUP9 197 aaKnown RBP19.45■□□□□ 0.7
VPS16-201ENST00000380443 ASF1BQ9NVP2 202 aa19.45■□□□□ 0.7
VPS16-201ENST00000380443 A8MXE2 369 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 ADAM20O43506 726 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 PSPNO60542 156 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 ID3Q02535 119 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 TUSC1Q2TAM9 212 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 FAM219AQ8IW50 185 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 ABHD17AQ96GS6 310 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 LURAP1Q96LR2 239 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 FZR1Q9UM11 496 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 C3orf80F5H4A9 247 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 CEACAM6P40199 344 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 KLF3P57682 345 aaPredicted RBP19.44■□□□□ 0.7
VPS16-201ENST00000380443 MRGPRGQ86SM5 289 aa19.44■□□□□ 0.7
VPS16-201ENST00000380443 ELOVL5Q9NYP7 299 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms