RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 HERPUD1Q15011 391 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF726P1Q15940 193 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF880Q6PDB4 577 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF818PQ6ZRF7 136 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 TMEM217Q8N7C4 229 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 SUMF1Q8NBK3 374 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 AGBL5Q8NDL9 886 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 EXTL1Q92935 676 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 LHX4Q969G2 390 aa7.04□□□□□ -1.28
PTPRR-203ENST00000378778 NEIL1Q96FI4 390 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-203ENST00000378778 C19orf25Q9UFG5 118 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-203ENST00000378778 YLPM1P49750 1951 aaKnown RBP7.03□□□□□ -1.28
PTPRR-203ENST00000378778 IGKV1-12A0A0C4DH73 117 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 F6UZH7 168 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 DEGS1O15121 323 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 ANGPTL7O43827 346 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 PDE6DO43924 150 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 TNFSF13O75888 250 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 IGKV1D-12P01611 117 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 SERPINE2P07093 398 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 FGF12P61328 243 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 ZNF542PQ5EBM4 170 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 MOB1BQ7L9L4 216 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 C7orf61Q8IZ16 206 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 NAXEQ8NCW5 288 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 TAF15Q92804 592 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTPRR-203ENST00000378778 GPR146Q96CH1 333 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 MIEN1Q9BRT3 115 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 ULBP2Q9BZM5 246 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 PSENENQ9NZ42 101 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 TNRC6BQ9UPQ9 1833 aaKnown RBP7.03□□□□□ -1.28
PTPRR-203ENST00000378778 CD300LBA8K4G0 201 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 RNF212BA8MTL3 300 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 TNFSF11O14788 317 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 SNRPCP09234 159 aaKnown RBP7.03□□□□□ -1.28
PTPRR-203ENST00000378778 ANOS1P23352 680 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 OR3A1P47881 315 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 MSMO1Q15800 293 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 SNAI3Q3KNW1 292 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 PIGYQ3MUY2 71 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 LCN15Q6UWW0 184 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 MKXQ8IYA7 352 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 PIP4P2Q8N4L2 257 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 MRPL30Q8TCC3 161 aaKnown RBP7.03□□□□□ -1.28
PTPRR-203ENST00000378778 WDYHV1Q96HA8 205 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 PRDM14Q9GZV8 571 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 RBKSQ9H477 322 aa7.03□□□□□ -1.28
PTPRR-203ENST00000378778 TRBV11-1A0A0K0K1C0 115 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 A0A1W2PNR3 127 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 FAM221AA4D161 298 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 C5orf63A6NC05 138 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 MLNRO43193 412 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 OPN1LWP04000 364 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF25P17030 456 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 YPEL3P61236 119 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 RPL15P61313 204 aaKnown RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 SELENOTP62341 195 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 RPL19P84098 196 aaKnown RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 RIPPLY2Q5TAB7 128 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 WDR74Q6RFH5 385 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TMEM144Q7Z5S9 345 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 LMX1AQ8TE12 382 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 ZCCHC14Q8WYQ9 949 aaKnown RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF501Q96CX3 271 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 SPACA9Q96E40 222 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 LIN7CQ9NUP9 197 aaKnown RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 OR2W1Q9Y3N9 320 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 PXMP4Q9Y6I8 212 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 RALGAPA1Q6GYQ0 2036 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 NCOA6Q14686 2063 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 IGHV1OR21-1A0A087WYE8 117 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF814B7Z6K7 855 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 GYPAP02724 150 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 LCATP04180 440 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 GZMHP20718 246 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TPPP2P59282 170 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 PPP1CBP62140 327 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 RPS18P62269 152 aaKnown RBP7.02□□□□□ -1.29
PTPRR-203ENST00000378778 COX19Q49B96 90 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 PLCXD3Q63HM9 321 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TMEM14EPQ6UXP3 125 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TCTEX1D1Q8N7M0 179 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 CYYR1Q96J86 154 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 DIRC2Q96SL1 478 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 PCGF1Q9BSM1 259 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TMEM147Q9BVK8 224 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 PARLQ9H300 379 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 RFNGQ9Y644 331 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 ADAMTS20P59510 1910 aa7.02□□□□□ -1.29
PTPRR-203ENST00000378778 TRBV9A0A0B4J1U6 114 aa7.01□□□□□ -1.29
PTPRR-203ENST00000378778 OR7C1O76099 320 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-203ENST00000378778 SCGB1D1O95968 90 aa7.01□□□□□ -1.29
PTPRR-203ENST00000378778 COX5AP20674 150 aa7.01□□□□□ -1.29
PTPRR-203ENST00000378778 DSCR4P56555 118 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-203ENST00000378778 P2RY6Q15077 328 aa7.01□□□□□ -1.29
PTPRR-203ENST00000378778 TMEM183BQ1AE95 376 aa7.01□□□□□ -1.29
PTPRR-203ENST00000378778 TIPARPQ7Z3E1 657 aaKnown RBP7.01□□□□□ -1.29
PTPRR-203ENST00000378778 ZNF295-AS1Q8N0V1 137 aa7.01□□□□□ -1.29
PTPRR-203ENST00000378778 ZBTB34Q8NCN2 500 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms