RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ERVK11-1P61568 191 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 KLRB1Q12918 225 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 DHRS11Q6UWP2 260 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 C1orf123Q9NWV4 160 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 DEGS1O15121 323 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 PGA5P0DJD9 388 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 RPL12P30050 165 aaKnown RBP16.43■□□□□ 0.22
SSU72-204ENST00000378726 GLRXP35754 106 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 RBMXP38159 391 aaKnown RBP16.43■□□□□ 0.22
SSU72-204ENST00000378726 EIF5AP63241 154 aaKnown RBP16.43■□□□□ 0.22
SSU72-204ENST00000378726 MSMPQ1L6U9 139 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 SWI5Q1ZZU3 235 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 EIF5AL1Q6IS14 154 aaKnown RBP16.43■□□□□ 0.22
SSU72-204ENST00000378726 ETV3LQ6ZN32 361 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 SFT2D1Q8WV19 159 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 RDH5Q92781 318 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 SMIM3Q9BZL3 60 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 JKAMPQ9P055 326 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 FBXL17Q9UF56 701 aa16.43■□□□□ 0.22
SSU72-204ENST00000378726 TRAV24A0A0B4J272 114 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 K7EPK0 472 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 SURF2Q15527 256 aaPredicted RBP16.42■□□□□ 0.22
SSU72-204ENST00000378726 LRP11Q86VZ4 500 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 C11orf53Q8IXP5 236 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 FAM71E2Q8N5Q1 922 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 LIME1Q9H400 295 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 CADP27708 2225 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 NCOR2Q9Y618 2525 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 COLCA2A8K830 154 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 FAM157AC9JC47 383 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 NXPH2O95156 264 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 ZNF205O95201 554 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 NAPSAO96009 420 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 ZNF44P15621 663 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 FCGR2CP31995 323 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 PEA15Q15121 130 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 RND1Q92730 232 aa16.42■□□□□ 0.22
SSU72-204ENST00000378726 MRPL24Q96A35 216 aaKnown RBP16.42■□□□□ 0.22
SSU72-204ENST00000378726 ZZEF1O43149 2961 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 ACAA1P09110 424 aaPredicted RBP16.41■□□□□ 0.22
SSU72-204ENST00000378726 OR8U9P0C7N5 309 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 CCKARP32238 428 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 NKX6-1P78426 367 aaPredicted RBP16.41■□□□□ 0.22
SSU72-204ENST00000378726 AKIRIN2Q53H80 203 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 Q6P435 159 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 VHLLQ6RSH7 139 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 Q6ZRG5 221 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 ZNF826PQ6ZT77 177 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 OR8U1Q8NH10 309 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 PARP11Q9NR21 331 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 TRGV8A0A0C4DH27 118 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 DEDDO75618 318 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 GLAP06280 429 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 F2RL1P55085 397 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 GGNBP1Q5YKI7 109 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 CLEC9AQ6UXN8 241 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 LINC00469Q8N7U9 141 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 VKORC1Q9BQB6 163 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 PARP12Q9H0J9 701 aaKnown RBP16.41■□□□□ 0.22
SSU72-204ENST00000378726 Q9N2K0 584 aa16.41■□□□□ 0.22
SSU72-204ENST00000378726 LSM5Q9Y4Y9 91 aaKnown RBP16.41■□□□□ 0.22
SSU72-204ENST00000378726 SPTA1P02549 2419 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 PCNX1Q96RV3 2341 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 CD40P25942 277 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 ECI1P42126 302 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 TMEM33P57088 247 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 PRAMEF6Q5VXH4 476 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 KIRREL1Q96J84 757 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 AKR1E2Q96JD6 320 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 DECR2Q9NUI1 292 aa16.4■□□□□ 0.22
SSU72-204ENST00000378726 A6NLC8 198 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 SLC34A2O95436 690 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 IGHV3-13P01766 116 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 AKR1C3P42330 323 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 SRSF7Q16629 238 aaKnown RBP eCLIP16.39■□□□□ 0.22
SSU72-204ENST00000378726 Q6ZS49 121 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 SGPP2Q8IWX5 399 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 GTF3AQ92664 365 aaKnown RBP16.39■□□□□ 0.22
SSU72-204ENST00000378726 BSCL2Q96G97 398 aaPredicted RBP16.39■□□□□ 0.22
SSU72-204ENST00000378726 RIMS4Q9H426 269 aaPredicted RBP16.39■□□□□ 0.22
SSU72-204ENST00000378726 UFSP2Q9NUQ7 469 aa16.39■□□□□ 0.22
SSU72-204ENST00000378726 CHD8Q9HCK8 2581 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 A0A1B0GWJ7 208 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 CRYM-AS1A6NIL9 109 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 SCGB1D2O95969 90 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 CTSDP07339 412 aaPredicted RBP16.39■□□□□ 0.21
SSU72-204ENST00000378726 DVL1P1P54792 670 aaPredicted RBP16.39■□□□□ 0.21
SSU72-204ENST00000378726 ZNF146Q15072 292 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 C5orf24Q7Z6I8 188 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 OR2Z1Q8NG97 314 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 TMEM171Q8WVE6 324 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 SECTM1Q8WVN6 248 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 ERGIC1Q969X5 290 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 CACFD1Q9UGQ2 172 aa16.39■□□□□ 0.21
SSU72-204ENST00000378726 EIF3GO75821 320 aaKnown RBP eCLIP16.38■□□□□ 0.21
SSU72-204ENST00000378726 JTBO76095 146 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 OR2H2O95918 312 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 POLR2GP62487 172 aaKnown RBP eCLIP16.38■□□□□ 0.21
SSU72-204ENST00000378726 IGSF11Q5DX21 431 aa16.38■□□□□ 0.21
SSU72-204ENST00000378726 UNQ6494/PRO21346Q6UXR6 183 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms