RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 FAM90A9PA6NNJ1 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 FAM90A12PA8MX19 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 FAM90A5PA8MXJ8 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 CASQ2O14958 399 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-204ENST00000377349 DUS4LO95620 317 aaKnown RBP15.17■□□□□ 0.02
CBWD3-204ENST00000377349 FAM90A15PP0C7V4 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 FAM90A13PP0C7W8 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 FAM90A14PP0C7W9 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 FAM90A24PP0C7X0 464 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 MGMTP16455 207 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 MAPK3P27361 379 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-204ENST00000377349 HOXD3P31249 432 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-204ENST00000377349 INSL4Q14641 139 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 SYT6Q5T7P8 510 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-204ENST00000377349 ZNF497Q6ZNH5 498 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 MRPL41Q8IXM3 137 aaKnown RBP15.17■□□□□ 0.02
CBWD3-204ENST00000377349 NANOGP1Q8N7R0 232 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 OR10A7Q8NGE5 316 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 MND1Q9BWT6 205 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 SPACA1Q9HBV2 294 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 GNG12Q9UBI6 72 aa15.17■□□□□ 0.02
CBWD3-204ENST00000377349 GPX5O75715 221 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 PAX5Q02548 391 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 GPR50Q13585 617 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 NKAPLQ5M9Q1 402 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 RBM48Q5RL73 367 aaKnown RBP15.16■□□□□ 0.02
CBWD3-204ENST00000377349 NKAIN3Q8N8D7 197 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 TMEM104Q8NE00 496 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 TFAP2CQ92754 450 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 LINC00574Q9H8X3 128 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 PLCXD1Q9NUJ7 323 aa15.16■□□□□ 0.02
CBWD3-204ENST00000377349 NKX1-2Q9UD57 310 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-204ENST00000377349 NCBP2LA6PVI3 153 aaKnown RBP15.15■□□□□ 0.02
CBWD3-204ENST00000377349 C15orf65H3BRN8 121 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 SPINT2O43291 252 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 MT-ND4P03905 459 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 IL3RAP26951 378 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 MED22Q15528 200 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 FAM27D1Q5T7N8 215 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 OR8H3Q8N146 312 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 GFOD1Q9NXC2 390 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 SCN3BQ9NY72 215 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 LINC00527Q9UJ94 153 aa15.15■□□□□ 0.02
CBWD3-204ENST00000377349 IGHV1-3A0A0C4DH29 117 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 SERPINE3A8MV23 424 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 C12orf77C9JDV5 145 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 GAPDHP04406 335 aaKnown RBP15.14■□□□□ 0.01
CBWD3-204ENST00000377349 CDK1P06493 297 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 AQP4P55087 323 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 ACSM3Q53FZ2 586 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 C6orf183Q5T699 404 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 SLC16A12Q6ZSM3 486 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 C18orf65Q6ZTR6 163 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 ZNF329Q86UD4 541 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 FBLIM1Q8WUP2 373 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 THRSPQ92748 146 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 CYYR1Q96J86 154 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 NOL4LQ96MY1 436 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-204ENST00000377349 DCLRE1BQ9H816 532 aa15.14■□□□□ 0.01
CBWD3-204ENST00000377349 HUWE1Q7Z6Z7 4374 aaKnown RBP15.14■□□□□ 0.01
CBWD3-204ENST00000377349 DNAH7Q8WXX0 4024 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 PSMB11A5LHX3 300 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 SLC31A2O15432 143 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 ORC5O43913 435 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 THBS3P49746 956 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 DEFB121Q5J5C9 76 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 THNSL2Q86YJ6 484 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 OR1L1Q8NH94 360 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 MRPS24Q96EL2 167 aaKnown RBP15.13■□□□□ 0.01
CBWD3-204ENST00000377349 RCC2Q9P258 522 aaKnown RBP15.13■□□□□ 0.01
CBWD3-204ENST00000377349 SORL1Q92673 2214 aa15.13■□□□□ 0.01
CBWD3-204ENST00000377349 HBZP02008 142 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 HSMCR30P0CW71 290 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 RCC1P18754 421 aaPredicted RBP15.12■□□□□ 0.01
CBWD3-204ENST00000377349 RPL23AP62750 156 aaKnown RBP15.12■□□□□ 0.01
CBWD3-204ENST00000377349 C6orf141Q5SZD1 244 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 C5orf56Q8N8D9 126 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 RBMXL1Q96E39 390 aaKnown RBP15.12■□□□□ 0.01
CBWD3-204ENST00000377349 CST11Q9H112 138 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 KCNK15Q9H427 330 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 RAB9BQ9NP90 201 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 FKBP14Q9NWM8 211 aa15.12■□□□□ 0.01
CBWD3-204ENST00000377349 VSIG8P0DPA2 414 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 FUT3P21217 361 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 ZNF816Q0VGE8 651 aaPredicted RBP15.11■□□□□ 0.01
CBWD3-204ENST00000377349 OR10K2Q6IF99 312 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 OR2W3Q7Z3T1 314 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 CEACAM19Q7Z692 300 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 SLC35E3Q7Z769 313 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 OR52M1Q8NGK5 317 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 TMEM203Q969S6 136 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 Q96M66 194 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 B9D2Q9BPU9 175 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 UQCC2Q9BRT2 126 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 CCDC90BQ9GZT6 254 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 KCNIP1Q9NZI2 227 aa15.11■□□□□ 0.01
CBWD3-204ENST00000377349 CD1AP06126 327 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 SPHARQ15513 63 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 LIPKQ5VXJ0 399 aa15.1■□□□□ 0.01
CBWD3-204ENST00000377349 GLT8D1Q68CQ7 371 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms