RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 PKIBQ9C010 78 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 INSIG2Q9Y5U4 225 aa10.29□□□□□ -0.76
VPS13A-205ENST00000376636 PLAURQ03405 335 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 RHBDD2Q6NTF9 364 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 MMP25Q9NPA2 562 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF275Q9NSD4 429 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-205ENST00000376636 ANKRD37Q7Z713 158 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 TMEM202A6NGA9 273 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 PAGE4O60829 102 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 C2orf83Q53S99 150 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 PTOV1Q86YD1 416 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 OR1L8Q8NGR8 309 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 A0A0B4J2E0 115 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 A0A1B0GX12 115 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF418Q8TF45 676 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-205ENST00000376636 C16orf92Q96LL3 132 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 FIZ1Q96SL8 496 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 TAF1P21675 1872 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 SEC11BP0C7V7 166 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 OR10D3Q8NH80 312 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 NUBPLQ8TB37 319 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 KCNE3Q9Y6H6 103 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 MRPS11P82912 194 aaKnown RBP10.28□□□□□ -0.76
VPS13A-205ENST00000376636 FOXF1Q12946 379 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 GLRX2Q9NS18 164 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 WSB2Q9NYS7 404 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-205ENST00000376636 HSPB7Q9UBY9 170 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 TNFSF15O95150 251 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 TCF23Q7RTU1 214 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 C8orf44Q96CB5 159 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 RARRES2Q99969 163 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 FREM3P0C091 2139 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 KCNE5Q9UJ90 142 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 CCL26Q9Y258 94 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 MED12Q93074 2177 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 GCSAMLQ5JQS6 135 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 OR11G2Q8NGC1 345 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 ZG16BQ96DA0 208 aa10.28□□□□□ -0.76
VPS13A-205ENST00000376636 POLR2AP24928 1970 aaKnown RBP10.28□□□□□ -0.76
VPS13A-205ENST00000376636 TRAV17A0A0B4J275 112 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 C3orf80F5H4A9 247 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 ELSPBP1Q96BH3 223 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 KCNK7Q9Y2U2 307 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 DNAJC25-GNG10A0A024R161 153 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 NDUFS8O00217 210 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 SYNGR1O43759 233 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 SLC25A20O43772 301 aa10.27□□□□□ -0.76
VPS13A-205ENST00000376636 RPS27P42677 84 aaKnown RBP10.27□□□□□ -0.76
VPS13A-205ENST00000376636 C17orf51A8MQB3 221 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 RFESDQ8TAC1 157 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF407Q9C0G0 2248 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 K7ESM1 405 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 FCMRO60667 390 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 MOSPD3O75425 235 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 DAOP14920 347 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 KIRREL2Q6UWL6 708 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 ABHD14BQ96IU4 210 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 BEX4Q9NWD9 120 aaPredicted RBP10.27□□□□□ -0.77
VPS13A-205ENST00000376636 LRP6O75581 1613 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 GZMHP20718 246 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 ID4P47928 161 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 SKP2Q13309 424 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF770Q6IQ21 691 aaPredicted RBP10.27□□□□□ -0.77
VPS13A-205ENST00000376636 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
VPS13A-205ENST00000376636 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 MMP16P51512 607 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 AGERQ15109 404 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 TEX30Q5JUR7 227 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 FOXB2Q5VYV0 432 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 OR1P1Q8NH06 330 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
VPS13A-205ENST00000376636 A0A0A6YYD5 115 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 NT5CQ8TCD5 201 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 NUDT8Q8WV74 236 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 NRIP2Q9BQI9 281 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 MT-CO3P00414 261 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 GABRG2P18507 467 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 SHISA7A6NL88 538 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 TMEM56-RWDD3S4R434 201 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 IGKV3-7A0A075B6H7 116 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 SLC17A3O00476 420 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 FZD5Q13467 585 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 ZNF774Q6NX45 483 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 OR5AC2Q9NZP5 309 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
VPS13A-205ENST00000376636 TCRBV16S1A1N1A0A5B0 115 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 IL11RAQ14626 422 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 OR51M1Q9H341 326 aa10.26□□□□□ -0.77
VPS13A-205ENST00000376636 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms