RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SSX7Q7RTT5 188 aa12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 CPEB3Q8NE35 698 aaKnown RBP12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
CLCNKA-202ENST00000375692 CLEC18AA5D8T8 446 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 PGLYRP1O75594 196 aaPredicted RBP12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 HBE1P02100 147 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 CCL2P13500 99 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 TLE1Q04724 770 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 CLEC18CQ8NCF0 446 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 OR51H1Q8NH63 302 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 CPT1CQ8TCG5 803 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 IGHV1-45A0A0A0MS14 117 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 NAPSAO96009 420 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 UMODP07911 640 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 RNF224P0DH78 156 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 GPM6AP51674 278 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 RAC3P60763 192 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 IL24Q13007 206 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 TRIP6Q15654 476 aaKnown RBP12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 Q6ZRM9 215 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 DEFB124Q8NES8 71 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 MEGF10Q96KG7 1140 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 SNX22Q96L94 193 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 CEP250Q9BV73 2442 aa12.06□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A1B0GV90 55 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF716A6NP11 495 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 SSR4P51571 173 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 TIPARPQ7Z3E1 657 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 IMMP1LQ96LU5 166 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 SPTBN2O15020 2390 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 SPAARA0A1B0GVQ0 90 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 KLF7O75840 302 aaPredicted RBP12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 TUSC2O75896 110 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 PTBP3O95758 552 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 IFNA5P01569 189 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 IAPPP10997 89 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 MMP9P14780 707 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 NUBP1P53384 320 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 ARL16Q0P5N6 197 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF787Q6DD87 383 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 STX12Q86Y82 276 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 ABHD14BQ96IU4 210 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 DCHS1Q96JQ0 3298 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 FREM1Q5H8C1 2179 aa12.05□□□□□ -0.48
CLCNKA-202ENST00000375692 KIAA1549Q9HCM3 1950 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 CHD3Q12873 2000 aaKnown RBP12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 A0A1B0GU03 582 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 CBR3O75828 277 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 MT-CO3P00414 261 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 PSG2P11465 335 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 COX6A1P12074 109 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 HNF4GQ14541 408 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 DCAF12Q5T6F0 453 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 MYPOPQ86VE0 399 aaPredicted RBP12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 OR5D13Q8NGL4 314 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 OR13D1Q8NGV5 346 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 MTCH1Q9NZJ7 389 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 CLDN34H7C241 214 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 CD55P08174 381 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 RFPL3SP0C7P2 107 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 METTL15P1P0C7V9 234 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 BCL2P10415 239 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 FOXO1Q12778 655 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 HES3Q5TGS1 186 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 GGNQ86UU5 652 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF488Q96MN9 340 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 GPR35Q9HC97 309 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 FOXJ2Q9P0K8 574 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 LRFN1Q9P244 771 aa12.04□□□□□ -0.48
CLCNKA-202ENST00000375692 KIAA1324LA8MWY0 1029 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 B4DEV8 164 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 C9orf172C9J069 976 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 PHOX2AO14813 284 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 F2RP25116 425 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 PRDX4Q13162 271 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 Q6ZS49 121 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 RPS19BP1Q86WX3 136 aaKnown RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 H1FOOQ8IZA3 346 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 CA5BP1Q8WTZ4 195 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 PACRGQ96M98 296 aaPredicted RBP12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 CABLES2Q9BTV7 478 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 ZNF391Q9UJN7 358 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 LOC400499M0QZD8 3231 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 ARHGAP21Q5T5U3 1957 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 LOC102723996A0A087X1L8 192 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 TRAV1-1A0A0B4J248 108 aa12.03□□□□□ -0.48
CLCNKA-202ENST00000375692 B4E171 279 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms