RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 C9J4A7 227 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 C3orf80F5H4A9 247 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 CYB5R3P00387 301 aaPredicted RBP11.75□□□□□ -0.53
USP49-201ENST00000373006 IFNA5P01569 189 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 GLB1P16278 677 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 ESPL1Q14674 2120 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 HERPUD1Q15011 391 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 FADS6Q8N9I5 356 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 OR4X1Q8NH49 305 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 OR51H1Q8NH63 302 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 TCFL5Q9UL49 500 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 PPIAL4AQ9Y536 164 aa11.75□□□□□ -0.53
USP49-201ENST00000373006 B4DEV8 164 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 BCL2P10415 239 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 NXPH1P58417 271 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 OR5I1Q13606 314 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 RAB35Q15286 201 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 GPR137CQ8N3F9 429 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 A0A0J9YW62 118 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 XKRY2A2RUG3 117 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 HOXA6P31267 233 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 FUT6P51993 359 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 BAXQ07812 192 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 SSPNQ14714 243 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 P2RY6Q15077 328 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 CST9LP1Q5W188 147 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 FOXL2NBQ6ZUU3 175 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 SRXN1Q9BYN0 137 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 PLA2G3Q9NZ20 509 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 CACNA1EQ15878 2313 aa11.74□□□□□ -0.53
USP49-201ENST00000373006 M0R143 59 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
USP49-201ENST00000373006 AMBPP02760 352 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 IAPPP10997 89 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 CEACAM1P13688 526 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 PSG4Q00888 419 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 ADIRFQ15847 76 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
USP49-201ENST00000373006 PLSCR2Q9NRY7 297 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 LAMP3Q9UQV4 416 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 METTL15P1P0C7V9 234 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 CCL3P10147 92 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 RND2P52198 227 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 PAX5Q02548 391 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 COL10A1Q03692 680 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 IL24Q13007 206 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 ZNF66Q6ZN08 573 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 PITPNC1Q9UKF7 332 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 BCL3P20749 454 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 ELLP55199 621 aaPredicted RBP11.73□□□□□ -0.53
USP49-201ENST00000373006 RABEPKQ7Z6M1 372 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 H1FOOQ8IZA3 346 aaPredicted RBP11.73□□□□□ -0.53
USP49-201ENST00000373006 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 DOCK11Q5JSL3 2073 aa11.73□□□□□ -0.53
USP49-201ENST00000373006 A0A1B0GUS0 222 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 ZIC3O60481 467 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 CCNOP22674 350 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 UCP1P25874 307 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 PRSS8Q16651 343 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 TMEM42Q69YG0 159 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 TEX38Q6PEX7 206 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 Q6ZRM9 215 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 OR10A7Q8NGE5 316 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 GPR146Q96CH1 333 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 Q9N2K0 584 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 FSCN3Q9NQT6 498 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
USP49-201ENST00000373006 IGKV1-6A0A0C4DH72 117 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 hCG_38984A0A1B0GV85 526 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 TP53I11O14683 189 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 RAB4BP61018 213 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 OR8B8Q15620 311 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 RBKSQ9H477 322 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 SEMA5BQ9P283 1151 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 DKKL1Q9UK85 242 aa11.72□□□□□ -0.53
USP49-201ENST00000373006 PTRH2Q9Y3E5 179 aaKnown RBP11.72□□□□□ -0.53
USP49-201ENST00000373006 PGLYRP1O75594 196 aaPredicted RBP11.71□□□□□ -0.53
USP49-201ENST00000373006 TRAPPC6AO75865 159 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 VAMP5O95183 116 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.53
USP49-201ENST00000373006 ARSJQ5FYB0 599 aaPredicted RBP11.71□□□□□ -0.53
USP49-201ENST00000373006 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 RCC1LQ96I51 464 aaKnown RBP11.71□□□□□ -0.53
USP49-201ENST00000373006 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 LOC102724200A0A096LPH7 203 aaPredicted RBP11.71□□□□□ -0.53
USP49-201ENST00000373006 A0A1W2PPQ1 181 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 DFFBO76075 338 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 DKK1O94907 266 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 OPN1MWP04001 364 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.53
USP49-201ENST00000373006 PSG2P11465 335 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms