RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 POLDIP2Q9Y2S7 368 aa4.35□□□□□ -1.71
UBE3D-202ENST00000369746 YARS2Q9Y2Z4 477 aaKnown RBP4.35□□□□□ -1.71
UBE3D-202ENST00000369746 FAM95CA0A1B0GW59 222 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 ETV2O00321 342 aaPredicted RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 HSBP1O75506 76 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 DUS4LO95620 317 aaKnown RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 CDS2O95674 445 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 ACP2P11117 423 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 GPD1P21695 349 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PPIBP23284 216 aaKnown RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 SRD5A2P31213 254 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PFN3P60673 137 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 BTG2P78543 158 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PRR20EP86478 221 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PRR20CP86479 221 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PRR20DP86480 221 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PRR20BP86481 221 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 PRR20AP86496 221 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 FZD2Q14332 565 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 LRRC10Q5BKY1 277 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 TPTE2P1Q5T6R2 138 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 FAM102AQ5T9C2 384 aaPredicted RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 LINC00336Q6ZUF6 198 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 MEX3DQ86XN8 651 aaKnown RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 DOLPP1Q86YN1 238 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 SPNS2Q8IVW8 549 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 LINC00471Q8N535 108 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 BMPERQ8N8U9 685 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 OR2Y1Q8NGV0 311 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 OR6K2Q8NGY2 324 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 OR2AJ1Q8NGZ0 328 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 OR13G1Q8NGZ3 307 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 GPR148Q8TDV2 347 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 Q8WTZ3 238 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 NDRG1Q92597 394 aaKnown RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 WNT2BQ93097 391 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 MS4A10Q96PG2 267 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 CIB3Q96Q77 187 aaPredicted RBP4.34□□□□□ -1.71
UBE3D-202ENST00000369746 TSSK6Q9BXA6 273 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 TUBB1Q9H4B7 451 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 TAS2R16Q9NYV7 291 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 SLAMF8Q9P0V8 285 aa4.34□□□□□ -1.71
UBE3D-202ENST00000369746 GXYLT2A0PJZ3 443 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 E9PLN8 166 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 PLPP1O14494 284 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 HCRTR1O43613 425 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 YPEL1O60688 119 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 DIRAS1O95057 198 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 IFNA1P01562 189 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 TRGC2P03986 189 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 ISG15P05161 165 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 VSIG10L2P0DP72 767 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 F2RP25116 425 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 IER3P46695 156 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF133P52736 654 aaPredicted RBP4.34□□□□□ -1.72
UBE3D-202ENST00000369746 PAFAH1B2P68402 229 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 C1orf61Q13536 156 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 C3AR1Q16581 482 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 IGFL2Q6UWQ7 119 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 TSEN54Q7Z6J9 526 aaKnown RBP4.34□□□□□ -1.72
UBE3D-202ENST00000369746 MSRB3Q8IXL7 192 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF676Q8N7Q3 588 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 FCAMRQ8WWV6 532 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 TSLPQ969D9 159 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 C8orf44Q96CB5 159 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 RCHY1Q96PM5 261 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 SIGLEC12Q96PQ1 595 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 AQP10Q96PS8 301 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 YPEL2Q96QA6 119 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 HIST1H2AAQ96QV6 131 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 VKORC1Q9BQB6 163 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 LPAR5Q9H1C0 372 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 OR52D1Q9H346 318 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 ASF1AQ9Y294 204 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 LAMTOR2Q9Y2Q5 125 aa4.34□□□□□ -1.72
UBE3D-202ENST00000369746 BAZ2BQ9UIF8 2168 aaKnown RBP4.34□□□□□ -1.72
UBE3D-202ENST00000369746 ANKRD17O75179 2603 aaKnown RBP4.34□□□□□ -1.72
UBE3D-202ENST00000369746 TRIP11Q15643 1979 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 A0A0G2JK05 382 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 SLC17A3O00476 420 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 RNASET2O00584 256 aaKnown RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 OXTP01178 125 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 IGLV3-27P01718 113 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 PGA3P0DJD8 388 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 VPREB1P12018 145 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 AZU1P20160 251 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 RPS4Y1P22090 263 aaKnown RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 CDAP32320 146 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 GLRXP35754 106 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 REG1BP48304 166 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 TAS2R43P59537 309 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 RPS21P63220 83 aaKnown RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 LTC4SQ16873 150 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 DCAF12Q5T6F0 453 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 HECTD2Q5U5R9 776 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 LCNL1Q6ZST4 164 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 MRGPREQ86SM8 312 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 CMTM1Q8IZ96 169 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 KLHDC1Q8N7A1 406 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 OR4K17Q8NGC6 315 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms