RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 OR4K15Q8NH41 348 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 SNAPC3Q92966 411 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 RNASE6Q93091 150 aaKnown RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 CMSS1Q9BQ75 279 aaKnown RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 GINS4Q9BRT9 223 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 TLNRD1Q9H1K6 362 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 ZNF701Q9NV72 531 aaPredicted RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 RCC2Q9P258 522 aaKnown RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 FZR1Q9UM11 496 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 PRRC2AP48634 2157 aaKnown RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 CBY3A6NI87 242 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 H0YL77 283 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 ARPC1BO15143 372 aaKnown RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 NOS1APO75052 506 aaPredicted RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 IFNA6P05013 189 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 GLAP06280 429 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 PGA5P0DJD9 388 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 MMP9P14780 707 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 CD200P41217 278 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 RAB25P57735 213 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 SPIN3Q5JUX0 258 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 METTL11BQ5VVY1 283 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 OR52W1Q6IF63 320 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 IDO2Q6ZQW0 420 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 Q6ZR03 302 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 LILRB1Q8NHL6 650 aaPredicted RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 SULT4A1Q9BR01 284 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 ZNF442Q9H7R0 627 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 C12orf4Q9NQ89 552 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 AK3Q9UIJ7 227 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 ABCD4O14678 606 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 B3GALNT1O75752 331 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 RHBDL1O75783 438 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 FCER2P06734 321 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 ZNF735P0CB33 412 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 TMEM11P17152 192 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 SNU13P55769 128 aaKnown RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 ERVK11-1P61568 191 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 RRAS2P62070 204 aaPredicted RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 CFHR3Q02985 330 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 ATAD3CQ5T2N8 411 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 TMEM17Q86X19 198 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 POC1AQ8NBT0 407 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 OR5H2Q8NGV7 314 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 MRPL24Q96A35 216 aaKnown RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 MED30Q96HR3 178 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 NRIP2Q9BQI9 281 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 FAAP24Q9BTP7 215 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 ESRP2Q9H6T0 727 aaKnown RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 GPN1Q9HCN4 374 aaPredicted RBP7.33□□□□□ -1.24
TPM3-213ENST00000368545 NDRG3Q9UGV2 375 aa7.33□□□□□ -1.24
TPM3-213ENST00000368545 F5H5P2 479 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 CDIPTO14735 213 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 CCNKO75909 580 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 NXPH2O95156 264 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 IL5P05113 134 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 FCGR3AP08637 254 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 OR3A3P47888 321 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 BSPH1Q075Z2 132 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 MAB21L1Q13394 359 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 RBM39Q14498 530 aaKnown RBP7.32□□□□□ -1.24
TPM3-213ENST00000368545 CARTPTQ16568 116 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 SRSF7Q16629 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
TPM3-213ENST00000368545 MICBQ29980 383 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 BATF2Q8N1L9 274 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 ZDHHC22Q8N966 263 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 OR5AP2Q8NGF4 316 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 CCDC107Q8WV48 283 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 GTF3AQ92664 365 aaKnown RBP7.32□□□□□ -1.24
TPM3-213ENST00000368545 WFIKKN1Q96NZ8 548 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 SLC6A7Q99884 636 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 ST6GALNAC5Q9BVH7 336 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 HES4Q9HCC6 221 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 CA10Q9NS85 328 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 GLS2Q9UI32 602 aa7.32□□□□□ -1.24
TPM3-213ENST00000368545 DPRXA6NFQ7 191 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 MCRIP1C9JLW8 97 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 F8VVB4 439 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 F8VWA3 439 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 PTBP3O95758 552 aaKnown RBP7.31□□□□□ -1.24
TPM3-213ENST00000368545 PMP2P02689 132 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 CSN2P05814 226 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 ARPC4P59998 168 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 ZNF146Q15072 292 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 CHRFAM7AQ494W8 412 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 SCGB2B2Q4G0G5 96 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 LRP11Q86VZ4 500 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 OR2Z1Q8NG97 314 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 SGMS2Q8NHU3 365 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 MRPL37Q9BZE1 423 aaKnown RBP7.31□□□□□ -1.24
TPM3-213ENST00000368545 ALX4Q9H161 411 aaPredicted RBP7.31□□□□□ -1.24
TPM3-213ENST00000368545 OR51J1Q9H342 316 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 RIMS4Q9H426 269 aaPredicted RBP7.31□□□□□ -1.24
TPM3-213ENST00000368545 ZNF286AQ9HBT8 521 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 TAAR3PQ9P1P4 343 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 FLVCR2Q9UPI3 526 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 CHD3Q12873 2000 aaKnown RBP7.31□□□□□ -1.24
TPM3-213ENST00000368545 SNRPGP15A8MWD9 76 aa7.31□□□□□ -1.24
TPM3-213ENST00000368545 CREBL2O60519 120 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms