RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 CD55P08174 381 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 ADH4P08319 380 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 C4BPBP20851 252 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 IL2RGP31785 369 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 BEX5Q5H9J7 111 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 OR10V1Q8NGI7 309 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 SNX22Q96L94 193 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 C3orf85A0A1B0GTC6 90 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 MEX3AA1L020 520 aaKnown RBP12.53□□□□□ -0.4
NEK2-201ENST00000366998 IFNA21P01568 189 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
NEK2-201ENST00000366998 LUMP51884 338 aaPredicted RBP12.53□□□□□ -0.4
NEK2-201ENST00000366998 RND3P61587 244 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 C11orf87Q6NUJ2 197 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 LIAT1Q6ZQX7 453 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 ZNF546Q86UE3 836 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 TGIF2LYQ8IUE0 185 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 ZNRF1Q8ND25 227 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 DEFB108BQ8NET1 73 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 ANGPTL6Q8NI99 470 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 GALMQ96C23 342 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 OR10C1Q96KK4 312 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 C2orf50Q96LR7 162 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
NEK2-201ENST00000366998 SAP30LQ9HAJ7 183 aa12.53□□□□□ -0.4
NEK2-201ENST00000366998 SEBOXQ9HB31 216 aaPredicted RBP12.53□□□□□ -0.4
NEK2-201ENST00000366998 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
NEK2-201ENST00000366998 HCFC1P51610 2035 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 LRRC30A6NM36 301 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 MGST3O14880 152 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 SNAPC5O75971 98 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 HBZP02008 142 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 S100GP29377 79 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 CEACAM6P40199 344 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 OPCMLQ14982 345 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 FAM209AQ5JX71 171 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
NEK2-201ENST00000366998 LDLRAD3Q86YD5 345 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 LGI3Q8N145 548 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 OR8H1Q8NGG4 311 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 FAM222BQ8WU58 562 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 TP53RKQ96S44 253 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 DCAF16Q9NXF7 216 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 GSKIPQ9P0R6 139 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 KCNS2Q9ULS6 477 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 KALRNO60229 2985 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
NEK2-201ENST00000366998 TNFSF12O43508 249 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 MPC2O95563 127 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 SLC25A4P12235 298 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 PSMB6P28072 239 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 GGNBP1Q5YKI7 109 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 LILRB1Q8NHL6 650 aaPredicted RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 GLYATL2Q8WU03 294 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 DCTN5Q9BTE1 182 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 MFFQ9GZY8 342 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 UBE2J1Q9Y385 318 aaPredicted RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 K7N7A8 449 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 SIAH2O43255 324 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 GYPAP02724 150 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 HEXAP06865 529 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 SELLP14151 372 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 GNLYP22749 145 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 SSTR5P35346 364 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 UQCRFS1P47985 274 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 EDDM3BP56851 147 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 IAH1Q2TAA2 248 aaPredicted RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 STUMQ69YW2 141 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 ZNF561Q8N587 486 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 NINJ1Q92982 152 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 MSI2Q96DH6 328 aaKnown RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 LURAP1Q96LR2 239 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 PARP12Q9H0J9 701 aaKnown RBP12.51□□□□□ -0.41
NEK2-201ENST00000366998 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
NEK2-201ENST00000366998 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
NEK2-201ENST00000366998 ODAMA1E959 279 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 B9A039 149 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 ATP6V1G1O75348 118 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 OR8U9P0C7N5 309 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 RPA2P15927 270 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 S100A11P31949 105 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 PAX5Q02548 391 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 LYZL2Q7Z4W2 148 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 OR52L2PQ8NGH6 319 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 OR8U1Q8NH10 309 aa12.5□□□□□ -0.41
NEK2-201ENST00000366998 MS4A5Q9H3V2 200 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms