RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 LOC285556D6RIA3 1793 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 LOC102723971A0A1B0GUV8 181 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 C17orf51A8MQB3 221 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 PDE6DO43924 150 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 ARR3P36575 388 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 TCL1AP56279 114 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 MUCL1Q96DR8 90 aa13.9□□□□□ -0.18
CLSTN1-201ENST00000361311 MYF5P13349 255 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 F2RP25116 425 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 CYB561P49447 251 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 HERPUD1Q15011 391 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 OR8G5Q8NG78 346 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 OR2W1Q9Y3N9 320 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 SIT1Q9Y3P8 196 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 KMT5CQ86Y97 462 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 RPRMQ9NS64 109 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 IGSF23A1L1A6 192 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 VSTM5A8MXK1 200 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 RPL36A-HNRNPH2H7BZ11 118 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 ANKRD37Q7Z713 158 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 TRIB1Q96RU8 372 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 RBKSQ9H477 322 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 SPTA1P02549 2419 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 TSPAN2O60636 221 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 CTSBP07858 339 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 MPZP25189 248 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 ELOBQ15370 118 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 KCNE4Q8WWG9 221 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 SLC35E1Q96K37 410 aa13.89□□□□□ -0.19
CLSTN1-201ENST00000361311 NGFP01138 241 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 GFI1BQ5VTD9 330 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 EDARADDQ8WWZ3 215 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 CHRDL1Q9BU40 450 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 SVILO95425 2214 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 CA11O75493 328 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 GLB1P16278 677 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 RBM11P57052 281 aaKnown RBP13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 MARS2Q96GW9 593 aaKnown RBP13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 TAAR3PQ9P1P4 343 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 TINAGQ9UJW2 476 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 RLFQ13129 1914 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 RHOBP62745 196 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 COL10A1Q03692 680 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 SPATA46Q5T0L3 261 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 STPG1Q5TH74 334 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 C1QL2Q7Z5L3 287 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 S1PR3Q99500 378 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 GABRG3Q99928 467 aa13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 BARX1Q9HBU1 254 aaPredicted RBP13.88□□□□□ -0.19
CLSTN1-201ENST00000361311 SPINK2P20155 84 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 PLPPR2Q96GM1 343 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 Q96M66 194 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 WDR61Q9GZS3 305 aaKnown RBP13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 OR2D2Q9H210 308 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 TSC2P49815 1807 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 DNAJC13O75165 2243 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 BCL3P20749 454 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 ZNF738Q8NE65 137 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 RNF122Q9H9V4 155 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 USF1P22415 310 aaPredicted RBP13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 LYSMD4Q5XG99 296 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 C1QL4Q86Z23 238 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 TMEM30CPA0ZSE6 113 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 LRRC3CA6NJW4 275 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 COX19Q49B96 90 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 HIST3H2BBQ8N257 126 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 PAQR4Q8N4S7 273 aaPredicted RBP13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
CLSTN1-201ENST00000361311 LINC01387J3KSC0 135 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 K7EQS6 105 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 KBTBD11O94819 623 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 NDUFB4O95168 129 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 BRS3P32247 399 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 SRSF4Q08170 494 aaKnown RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 SELENOHQ8IZQ5 122 aaKnown RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 ABHD14AQ9BUJ0 271 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 PARLQ9H300 379 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 TRAV39A0A0B4J263 110 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 TOX3O15405 576 aaPredicted RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 OR5G3P0C626 314 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 MRPL54Q6P161 138 aaKnown RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 TMEM92Q6UXU6 159 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 OR4B1Q8NGF8 309 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 OR5R1Q8NH85 324 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 RFESDQ8TAC1 157 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 TAF15Q92804 592 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 AHCTF1Q8WYP5 2266 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 LOC102724200A0A096LPH7 203 aaPredicted RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 CCL2P13500 99 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 CD99P14209 185 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 JOSD1Q15040 202 aaPredicted RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 RBM14Q96PK6 669 aaKnown RBP13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 DUSP13Q9UII6 198 aa13.86□□□□□ -0.19
CLSTN1-201ENST00000361311 H0Y980 276 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms