RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 OR6F1Q8NGZ6 308 aa18.1■□□□□ 0.49
HOXA4-201ENST00000360046 GALMQ96C23 342 aa18.1■□□□□ 0.49
HOXA4-201ENST00000360046 ZNF2Q9BSG1 426 aaPredicted RBP18.1■□□□□ 0.49
HOXA4-201ENST00000360046 TMPRSS13Q9BYE2 586 aa18.1■□□□□ 0.49
HOXA4-201ENST00000360046 NUDT15Q9NV35 164 aa18.1■□□□□ 0.49
HOXA4-201ENST00000360046 SLC2A8Q9NY64 477 aa18.1■□□□□ 0.49
HOXA4-201ENST00000360046 NDUFS8O00217 210 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 SPINT2O43291 252 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 MEF2CQ06413 473 aaPredicted RBP18.09■□□□□ 0.49
HOXA4-201ENST00000360046 TCF23Q7RTU1 214 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 OR10J5Q8NHC4 309 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 RFESDQ8TAC1 157 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 C10orf105Q8TEF2 133 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 CABLES2Q9BTV7 478 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 SLC23A1Q9UHI7 598 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 TRAV6A0A075B6T7 132 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 HSPA12AO43301 675 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 NDUFB6O95139 128 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 NFYAP23511 347 aaPredicted RBP18.09■□□□□ 0.49
HOXA4-201ENST00000360046 FCGR2CP31995 323 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 GNB2P62879 340 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 WDR25Q64LD2 544 aaPredicted RBP18.09■□□□□ 0.49
HOXA4-201ENST00000360046 UPRTQ96BW1 309 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 CALYQ9NYX4 217 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 LPAR3Q9UBY5 353 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 LINC00312Q9Y6C7 94 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 VPS13CQ709C8 3753 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 MALRD1Q5VYJ5 2156 aa18.09■□□□□ 0.49
HOXA4-201ENST00000360046 C15orf65H3BRN8 121 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 NPY4RP50391 375 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 CR1LQ2VPA4 569 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 BTN2A1Q7KYR7 527 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 OR13C8Q8NGS7 320 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 TERB2Q8NHR7 220 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 C20orf85Q9H1P6 137 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 OR1A1Q9P1Q5 309 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 NUBP2Q9Y5Y2 271 aa18.08■□□□□ 0.48
HOXA4-201ENST00000360046 TRBV6-7A0A0A0MS04 114 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 F5H0A9 414 aaPredicted RBP18.07■□□□□ 0.48
HOXA4-201ENST00000360046 GPR37O15354 613 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 PHF1O43189 567 aaPredicted RBP18.07■□□□□ 0.48
HOXA4-201ENST00000360046 HNRNPCP07910 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
HOXA4-201ENST00000360046 ZNF273Q14593 569 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 LTC4SQ16873 150 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 CLEC12BQ2HXU8 276 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 ESCO2Q56NI9 601 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 NINJ1Q92982 152 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 SSBP3Q9BWW4 388 aaPredicted RBP18.07■□□□□ 0.48
HOXA4-201ENST00000360046 OPN4Q9UHM6 478 aa18.07■□□□□ 0.48
HOXA4-201ENST00000360046 UBE2J1Q9Y385 318 aaPredicted RBP18.07■□□□□ 0.48
HOXA4-201ENST00000360046 YLPM1P49750 1951 aaKnown RBP18.07■□□□□ 0.48
HOXA4-201ENST00000360046 TRBV23-1A0A0A0MS06 115 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 IGHV2-5P01817 119 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 DSCR9P59020 149 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 TMEM200BQ69YZ2 307 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 ZNF660Q6AZW8 331 aaPredicted RBP18.06■□□□□ 0.48
HOXA4-201ENST00000360046 DHRS11Q6UWP2 260 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 LRRC75A-AS1Q8N1F1 130 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 CLDND2Q8NHS1 167 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 CORO2AQ92828 525 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 CREB3L1Q96BA8 519 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 SLC25A21Q9BQT8 299 aaPredicted RBP18.06■□□□□ 0.48
HOXA4-201ENST00000360046 RAB9BQ9NP90 201 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 FLVCR2Q9UPI3 526 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 ITPR2Q14571 2701 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 IGHV4-30-2A0A087WSY4 118 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 KBTBD11-OT1A0A1B0GTJ5 212 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 OR5H14A6NHG9 310 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 ZNF729A6NN14 1252 aaPredicted RBP18.06■□□□□ 0.48
HOXA4-201ENST00000360046 ARPC1BO15143 372 aaKnown RBP18.06■□□□□ 0.48
HOXA4-201ENST00000360046 OMGP23515 440 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 BCAP31P51572 246 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 RAB25P57735 213 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 FXYD4P59646 89 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 HERV-K104P61576 105 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 C17orf58Q2M2W7 97 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 LHFPL1Q86WI0 220 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 OR52L2PQ8NGH6 319 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 MRGPRFQ96AM1 343 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 MBD6Q96DN6 1003 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 GAL3ST2Q9H3Q3 398 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 ZNF69Q9UC07 566 aa18.06■□□□□ 0.48
HOXA4-201ENST00000360046 DIRAS3O95661 229 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 RLN1P04808 185 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 CGB3P0DN86 165 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 CGB7P0DN87 165 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 AADACP22760 399 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 ZBTB25P24278 435 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 AADACL3Q5VUY0 350 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 MARCH1Q8TCQ1 289 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 GIMAP1Q8WWP7 306 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 TOMM40LQ969M1 308 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 ZNF714Q96N38 554 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 OR2S2Q9NQN1 319 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 TAS2R3Q9NYW6 316 aa18.05■□□□□ 0.48
HOXA4-201ENST00000360046 IGHV3-43A0A0B4J1X8 118 aa18.04■□□□□ 0.48
HOXA4-201ENST00000360046 FAM172BPA6NC97 362 aa18.04■□□□□ 0.48
HOXA4-201ENST00000360046 VWC2LB2RUY7 222 aa18.04■□□□□ 0.48
HOXA4-201ENST00000360046 NPIPB11E5RHQ5 1161 aa18.04■□□□□ 0.48
HOXA4-201ENST00000360046 PPYP01298 95 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms