RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CBX5P45973 191 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 HLA-DRB3P79483 266 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 KIR2DS1Q14954 304 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 HMGN3Q15651 99 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 IL1F10Q8WWZ1 152 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 ABHD1Q96SE0 405 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 SCPEP1Q9HB40 452 aa12.5□□□□□ -0.41
TPM1-206ENST00000358278 PRTN3P24158 256 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 DLX1P56177 255 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 CCDC190Q86UF4 302 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 C11orf42Q8N5U0 333 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 GALMQ96C23 342 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 KIRREL1Q96J84 757 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 TBX15Q96SF7 602 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 IDI2-AS1Q9NZ38 188 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
TPM1-206ENST00000358278 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 TRDCB7Z8K6 153 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 NPIPB11E5RHQ5 1161 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 SULT1C2O00338 296 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 SDCBPO00560 298 aaPredicted RBP12.48□□□□□ -0.41
TPM1-206ENST00000358278 MMP23AO75900 390 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 FCER2P06734 321 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 FPR2P25090 351 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
TPM1-206ENST00000358278 PRB3Q04118 309 aaPredicted RBP12.48□□□□□ -0.41
TPM1-206ENST00000358278 NCR3LG1Q68D85 454 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 FCAMRQ8WWV6 532 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 LHX4Q969G2 390 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 UPRTQ96BW1 309 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 GSX1Q9H4S2 264 aaPredicted RBP12.48□□□□□ -0.41
TPM1-206ENST00000358278 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 UNKLQ9H9P5 680 aaKnown RBP12.48□□□□□ -0.41
TPM1-206ENST00000358278 V9GYH0 126 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 FABP7O15540 132 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 AVPP01185 164 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 SCTP09683 121 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 COX7A1P24310 79 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 GDNFP39905 211 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 ETV6P41212 452 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 KLRD1Q13241 179 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
TPM1-206ENST00000358278 Q6ZS49 121 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 Q71RC1 249 aaPredicted RBP12.48□□□□□ -0.41
TPM1-206ENST00000358278 C5orf24Q7Z6I8 188 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 PDZD9Q8IXQ8 264 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 OR4A4PQ8NGN8 299 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 SUCNR1Q9BXA5 334 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 HEXA-AS1Q9H8Q6 139 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 GNG12Q9UBI6 72 aa12.48□□□□□ -0.41
TPM1-206ENST00000358278 IGHV3-43A0A0B4J1X8 118 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 GABARAPH6UMI1 98 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 F2RL2O00254 374 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 HSPA12AO43301 675 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 IGHV3-43DP0DP04 118 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 HOXB4P17483 251 aaPredicted RBP12.47□□□□□ -0.41
TPM1-206ENST00000358278 HNF1AP20823 631 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 ARPC4P59998 168 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 DGCR2P98153 550 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 FAM120AOSQ5T036 256 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 GPR157Q5UAW9 335 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
TPM1-206ENST00000358278 TEX29Q8N6K0 151 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 OR13D1Q8NGV5 346 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 SOSTQ9BQB4 213 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
TPM1-206ENST00000358278 CTDSPLO15194 276 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 GSTT2P0CG29 244 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 GSTT2BP0CG30 244 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.415e-7■■■□□ 15.6
TPM1-206ENST00000358278 ACTBP60709 375 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 ACTG1P63261 375 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 LINC00299Q6ZSB3 139 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 HOGA1Q86XE5 327 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 PNKDQ8N490 385 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 NANPQ8TBE9 248 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 TNFRSF14Q92956 283 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 SLC23A1Q9UHI7 598 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 ANXA10Q9UJ72 324 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 JPT1Q9UK76 154 aa12.46□□□□□ -0.41
TPM1-206ENST00000358278 IGHV3OR16-10A0A075B7F0 116 aa12.45□□□□□ -0.42
TPM1-206ENST00000358278 IGKV1D-8A0A087WSZ0 117 aa12.45□□□□□ -0.42
TPM1-206ENST00000358278 RNASEK-C17orf49H0YIS7 233 aa12.45□□□□□ -0.42
TPM1-206ENST00000358278 BET1O15155 118 aa12.45□□□□□ -0.42
TPM1-206ENST00000358278 RBBP9O75884 186 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms