RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 KRASP01116 189 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 CXorf66Q5JRM2 361 aaPredicted RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 ZNF765Q7L2R6 523 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 C11orf40Q8WZ69 217 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 ADIPOR1Q96A54 375 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 FAM206AQ9NX38 181 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 CLEC1BQ9P126 229 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 LSM7Q9UK45 103 aaKnown RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 KMT2EQ8IZD2 1858 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 PRRC2BQ5JSZ5 2229 aaKnown RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 SNRNP200O75643 2136 aaKnown RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 GJE1A6NN92 205 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 PPIAL4GP0DN37 164 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 PRRX1P54821 245 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 FMODQ06828 376 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 ELAVL3Q14576 367 aaKnown RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 PSG3Q16557 428 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 WBP2NLQ6ICG8 309 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 FAM216AQ8WUB2 273 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 SPIN2AQ99865 258 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 SPIN2BQ9BPZ2 258 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 APOOQ9BUR5 198 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 KLHL13Q9P2N7 655 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
RTN3-205ENST00000356000 DAPP1Q9UN19 280 aa13.53□□□□□ -0.24
RTN3-205ENST00000356000 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 J3QR06 171 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 PSMB3P49720 205 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 CLDN17P56750 224 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 FER1L6-AS1Q8NA97 138 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 NUS1Q96E22 293 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 TM2D1Q9BX74 207 aa13.52□□□□□ -0.24
RTN3-205ENST00000356000 REG1AP05451 166 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 IFI6P09912 130 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 ZNF20P17024 532 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 ANOS1P23352 680 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 SERF2P84101 59 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 DEFB125Q8N687 156 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 WNT10AQ9GZT5 417 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 TMEM74BQ9NUR3 256 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 LRRK1Q38SD2 2015 aa13.52□□□□□ -0.25
RTN3-205ENST00000356000 RPL27P61353 136 aaKnown RBP13.51□□□□□ -0.25
RTN3-205ENST00000356000 ID3Q02535 119 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 FAM57BQ71RH2 274 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 OR2M3Q8NG83 312 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 LHX4Q969G2 390 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 SAA2-SAA4A0A096LPE2 208 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 G3V3Y1 287 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 CDIPTO14735 213 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 FREM3P0C091 2139 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 C3orf79P0CE67 100 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 KITLGP21583 273 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 MLF2Q15773 248 aaPredicted RBP13.51□□□□□ -0.25
RTN3-205ENST00000356000 ASCL4Q6XD76 172 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 BHLHA15Q7RTS1 189 aaPredicted RBP13.51□□□□□ -0.25
RTN3-205ENST00000356000 VN1R4Q7Z5H5 301 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 VASH2Q86V25 355 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 COMMD2Q86X83 199 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 OR11L1Q8NGX0 322 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 SCGB1C1Q8TD33 95 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 MRPL18Q9H0U6 180 aaKnown RBP13.51□□□□□ -0.25
RTN3-205ENST00000356000 NECAP2Q9NVZ3 263 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 PSG11Q9UQ72 335 aa13.51□□□□□ -0.25
RTN3-205ENST00000356000 C11orf98E9PRG8 122 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 PAX9P55771 341 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 FXYD4P59646 89 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 CNN3Q15417 329 aaKnown RBP13.5□□□□□ -0.25
RTN3-205ENST00000356000 DNM1P34Q6PK57 102 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 OR4F5Q8NH21 305 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 ZNF48Q96MX3 618 aaPredicted RBP13.5□□□□□ -0.25
RTN3-205ENST00000356000 KLHDC3Q9BQ90 382 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 PBOV1Q9GZY1 135 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 COA3Q9Y2R0 106 aaPredicted RBP13.5□□□□□ -0.25
RTN3-205ENST00000356000 ARID1BQ8NFD5 2236 aaPredicted RBP13.5□□□□□ -0.25
RTN3-205ENST00000356000 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 TNFSF12O43508 249 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 CBLN1P23435 193 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 MLF1P58340 268 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 PSG9Q00887 426 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 TESK1Q15569 626 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 ACKR1Q16570 336 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 PARS2Q7L3T8 475 aaKnown RBP13.5□□□□□ -0.25
RTN3-205ENST00000356000 COL4A2P08572 1712 aa13.5□□□□□ -0.25
RTN3-205ENST00000356000 CHST1O43916 411 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 GNG7O60262 68 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 IGLC1P0CG04 106 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 AMTP48728 403 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 PMCHL1Q16048 86 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 CCDC71LQ8N9Z2 235 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 SSC4DQ8WTU2 575 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 HDHD3Q9BSH5 251 aaPredicted RBP13.49□□□□□ -0.25
RTN3-205ENST00000356000 FBRSQ9HAH7 460 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 POLR1DQ9Y2S0 133 aa13.49□□□□□ -0.25
RTN3-205ENST00000356000 PTRH2Q9Y3E5 179 aaKnown RBP13.49□□□□□ -0.25
RTN3-205ENST00000356000 SZT2Q5T011 3432 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms