RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 DEGS2Q6QHC5 323 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 TCTEX1D1Q8N7M0 179 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 OR10G4Q8NGN3 311 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 OR10G9Q8NGN4 311 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 OR10G7Q8NGN6 311 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF519Q8TB69 540 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 SLC26A1Q9H2B4 701 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 MOB1AQ9H8S9 216 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 VSTM5A8MXK1 200 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 CHEK1O14757 476 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 CCL11P51671 97 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 SUMO3P55854 103 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-202ENST00000355815 UBE2G1P62253 170 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 FHL1Q13642 323 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 RTN4RL2Q86UN3 420 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 OR10D3Q8NH80 312 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 LHFPL6Q9Y693 200 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 LRRK1Q38SD2 2015 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 P2RY4P51582 365 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 C6orf15Q6UXA7 325 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-202ENST00000355815 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 RNF144BQ7Z419 303 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 OR5AU1Q8NGC0 362 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 PECRQ9BY49 303 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 IER3P46695 156 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 GPM6AP51674 278 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 SCAND1P57086 179 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 RND3P61587 244 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 GCH1P30793 250 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 P2RY1P47900 373 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 DSCR4P56555 118 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-202ENST00000355815 KCNIP2Q9NS61 270 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 HIF1ANQ9NWT6 349 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 PNRC1Q12796 327 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-202ENST00000355815 LIAT1Q6ZQX7 453 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 C1QL2Q7Z5L3 287 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-202ENST00000355815 TP53RKQ96S44 253 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 TIMM10BQ9Y5J6 103 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 MYO7BQ6PIF6 2116 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 IGKV3D-11A0A0A0MRZ8 115 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 TRAV14DV4A0A0A6YYC5 116 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF891A8MT65 544 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-202ENST00000355815 PGA3P0DJD8 388 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-202ENST00000355815 THBS3P49746 956 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 OR6X1Q8NH79 312 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 PPP1R35Q8TAP8 253 aa12.24□□□□□ -0.45
SREBF1-202ENST00000355815 NEIL1Q96FI4 390 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-202ENST00000355815 A0A1B0GTQ1 180 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 GRIFINA4D1Z8 144 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF732B4DXR9 585 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 OR10J1P30954 320 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 ROM1Q03395 351 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 PIGYQ3MUY2 71 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 Q56UQ5 140 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 COL5A1-AS1Q5SY13 56 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 SLC36A1Q7Z2H8 476 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 TBC1D26Q86UD7 250 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 SGMS2Q8NHU3 365 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 M1APQ8TC57 530 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CDX2Q99626 313 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 G6PC2Q9NQR9 355 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 LYRM2Q9NU23 88 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CLDN16Q9Y5I7 305 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 SERTM2A0A1B0GWG4 89 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 SPINT2O43291 252 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 DHRS3O75911 302 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 OR3A1P47881 315 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 IZUMO4Q1ZYL8 232 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CXorf67Q86X51 503 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 OR1F12Q8NHA8 337 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 WASHC3Q9Y3C0 194 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 ABCA4P78363 2273 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 DEFB108AA8MXU0 73 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 ENSAO43768 121 aaKnown RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CD74P04233 296 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CTSDP07339 412 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 EGR1P18146 543 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CCKARP32238 428 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 NUFIP2Q7Z417 695 aaKnown RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 MRPL30Q8TCC3 161 aaKnown RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 NOL4LQ96MY1 436 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-202ENST00000355815 OR13G1Q8NGZ3 307 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 PP6455Q8WZ26 134 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 CCL28Q9NRJ3 127 aa12.23□□□□□ -0.45
SREBF1-202ENST00000355815 A0A1W2PPE3 182 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 C11orf94C9JXX5 98 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-202ENST00000355815 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 ADAMTS17Q8TE56 1095 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
SREBF1-202ENST00000355815 SNURFLB1AK76 121 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms