RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 DHRS11Q6UWP2 260 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 IL22RA2Q969J5 263 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 PRR33A8MZF0 331 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 ADAD2Q8NCV1 583 aaKnown RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 AP5S1Q9NUS5 200 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 DAOP14920 347 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 TMEM50BP56557 158 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 PNRC1Q12796 327 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 C10orf111Q8N326 155 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 OR2T10Q8NGZ9 312 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 ARAP2Q8WZ64 1704 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 ATG2BQ96BY7 2078 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 AREGP15514 252 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 ZP4Q12836 540 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 TMEM183BQ1AE95 376 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 STXBP6Q8NFX7 210 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 NEURL2Q9BR09 285 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 GSX1Q9H4S2 264 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 CHODLQ9H9P2 273 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 PARP11Q9NR21 331 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 RCC2Q9P258 522 aaKnown RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF107Q9UII5 783 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 NPIPB8E9PQR5 432 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 MELTFP08582 738 aa15.69■□□□□ 0.1
COL18A1-202ENST00000355480 SNRNP40Q96DI7 357 aaKnown RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 MRPL37Q9BZE1 423 aaKnown RBP15.69■□□□□ 0.1
COL18A1-202ENST00000355480 C9orf172C9J069 976 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 C16orf82Q7Z2V1 217 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 ANGPTL4Q9BY76 406 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 SLC35E4Q6ICL7 350 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 SLC35E3Q7Z769 313 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF519Q8TB69 540 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 CISD1Q9NZ45 108 aaKnown RBP15.68■□□□□ 0.1
COL18A1-202ENST00000355480 PRSS50Q9UI38 385 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 TTRP02766 147 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 PAGE4O60829 102 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 SRSF10O75494 262 aaKnown RBP15.68■□□□□ 0.1
COL18A1-202ENST00000355480 CDS2O95674 445 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 CEACAM21Q3KPI0 293 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 SLC25A45Q8N413 288 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 ANAPC16Q96DE5 110 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 VAX2Q9UIW0 290 aa15.68■□□□□ 0.1
COL18A1-202ENST00000355480 MFSD2BA6NFX1 497 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 PTBP3O95758 552 aaKnown RBP15.67■□□□□ 0.1
COL18A1-202ENST00000355480 HERVK_113P61574 105 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 OR4C5Q8NGB2 326 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 MGST3O14880 152 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 ZNHIT1O43257 154 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF253O75346 499 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 HIGD1AQ9Y241 93 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 HELTA6NFD8 242 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 NGFRP08138 427 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 CRISP2P16562 243 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 SNRPEP62304 92 aaKnown RBP15.67■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF273Q14593 569 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 HIST3H3Q16695 136 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 ZNF658BQ4V348 819 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-202ENST00000355480 LYRM2Q9NU23 88 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-202ENST00000355480 GFRA3O60609 400 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 EFNB2P52799 333 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 C19orf57Q0VDD7 668 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 MRPL54Q6P161 138 aaKnown RBP15.67■□□□□ 0.1
COL18A1-202ENST00000355480 KLHDC2Q9Y2U9 406 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 TMSB15BA0A087X1C1 80 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 GAPDHP04406 335 aaKnown RBP15.67■□□□□ 0.1
COL18A1-202ENST00000355480 SCGB1D4Q6XE38 83 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 V9GYH0 126 aa15.67■□□□□ 0.1
COL18A1-202ENST00000355480 PTP4A3O75365 173 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 FGF5P12034 268 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 TMEM255AQ5JRV8 349 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 BVESQ8NE79 360 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 GPA33Q99795 319 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 IGHV3-72A0A0B4J1Y9 119 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 CXorf1O96002 111 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 SP9P0CG40 484 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 TFPI2P48307 235 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 TGIF1Q15583 401 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 Q6ZN92 141 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 ITLN1Q8WWA0 313 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 ABCA3Q99758 1704 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 CBY3A6NI87 242 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 PSMB2P49721 201 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 ROM1Q03395 351 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 HOGA1Q86XE5 327 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 SHISA5Q8N114 240 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 SCMH1Q96GD3 660 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 MS4A3Q96HJ5 214 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 PILRBQ9UKJ0 227 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 DXOO77932 396 aaKnown RBP15.66■□□□□ 0.1
COL18A1-202ENST00000355480 FAM106CPP0CH98 169 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 KLF9Q13886 244 aaPredicted RBP15.66■□□□□ 0.1
COL18A1-202ENST00000355480 OR1L6Q8NGR2 347 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 HPRT1P00492 218 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 ASAH2BP0C7U1 165 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 CD1BP29016 333 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 RNFT1Q5M7Z0 435 aa15.66■□□□□ 0.1
COL18A1-202ENST00000355480 IGKV1-8A0A0C4DH67 115 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 SLC35B1P78383 322 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms