RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SPG11Q96JI7 2443 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
CTSA-202ENST00000354880 DVL1O14640 695 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 HSPA12AO43301 675 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 FCN3O75636 299 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 TUSC2O75896 110 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 HBZP02008 142 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 IL5P05113 134 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 VSIG10L2P0DP72 767 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 PGAM2P15259 253 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 COL8A1P27658 744 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 IL2RGP31785 369 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 FXYD4P59646 89 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 HERV-K104P61576 105 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 GHITMQ9H3K2 345 aa12.94□□□□□ -0.34
CTSA-202ENST00000354880 TRGV10A0A0A0MS01 117 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 SPINT2O43291 252 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 PFDN1O60925 122 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 CBX3Q13185 183 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 SLC25A42Q86VD7 318 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 CAPSLQ8WWF8 208 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 SEC22CQ9BRL7 303 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 FXYD6Q9H0Q3 95 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 C5orf66Q9H5L9 145 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 OR1A1Q9P1Q5 309 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 DOPEY2Q9Y3R5 2298 aa12.93□□□□□ -0.34
CTSA-202ENST00000354880 FAM172BPA6NC97 362 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 C15orf65H3BRN8 121 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 HEXAP06865 529 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 OR4E1P0C645 316 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 ZNF728P0DKX0 622 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 PI3P19957 117 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 ZBTB25P24278 435 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 C4orf46Q504U0 113 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 H1FOOQ8IZA3 346 aaPredicted RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 RFESDQ8TAC1 157 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 RTBDNQ9BSG5 229 aaPredicted RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 GPN1Q9HCN4 374 aaPredicted RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 ZNF69Q9UC07 566 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 ZNF221Q9UK13 617 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 FBN2P35556 2912 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 VPS13CQ709C8 3753 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 hADV38S2A0JD32 116 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 CEACAM6P40199 344 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 UCP3P55916 312 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 TAS2R31P59538 309 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 RPL31P62899 125 aaKnown RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 MEF2CQ06413 473 aaPredicted RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 FAHD2BQ6P2I3 314 aaPredicted RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 SPICQ8N5J4 248 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 ADAD2Q8NCV1 583 aaKnown RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 ZFAND1Q8TCF1 268 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 FAHD2AQ96GK7 314 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 OR51J1Q9H342 316 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 MIOXQ9UGB7 285 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
CTSA-202ENST00000354880 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
CTSA-202ENST00000354880 SNRPGP15A8MWD9 76 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 CREBL2O60519 120 aaPredicted RBP12.91□□□□□ -0.34
CTSA-202ENST00000354880 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 CTSDP07339 412 aaPredicted RBP12.91□□□□□ -0.34
CTSA-202ENST00000354880 CGB3P0DN86 165 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 CGB7P0DN87 165 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 AKR1C4P17516 323 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 GPR6P46095 362 aaPredicted RBP12.91□□□□□ -0.34
CTSA-202ENST00000354880 HTD2P86397 168 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 TMEM128Q5BJH2 165 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 SLC38A6Q8IZM9 456 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 OR52B4Q8NGK2 314 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 CHAC2Q8WUX2 184 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 H1FXQ92522 213 aaKnown RBP12.91□□□□□ -0.34
CTSA-202ENST00000354880 CORO2AQ92828 525 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 NINJ1Q92982 152 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 RAB9BQ9NP90 201 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 OR2S2Q9NQN1 319 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 RDH8Q9NYR8 311 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 CALYQ9NYX4 217 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 LINC00312Q9Y6C7 94 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 ARID1AO14497 2285 aa12.91□□□□□ -0.34
CTSA-202ENST00000354880 RRAS2P62070 204 aaPredicted RBP12.9□□□□□ -0.34
CTSA-202ENST00000354880 ZNF626Q68DY1 528 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 ZNF841Q6ZN19 808 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 NLRC3Q7RTR2 1065 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 OR52L2PQ8NGH6 319 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 SECTM1Q8WVN6 248 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 C19orf12Q9NSK7 152 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 UBE2J1Q9Y385 318 aaPredicted RBP12.9□□□□□ -0.34
CTSA-202ENST00000354880 IGKV1D-13A0A0B4J2D9 117 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 KBTBD11-OT1A0A1B0GTJ5 212 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 HMX3A6NHT5 357 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 ZNF729A6NN14 1252 aaPredicted RBP12.9□□□□□ -0.34
CTSA-202ENST00000354880 F2RL2O00254 374 aa12.9□□□□□ -0.34
CTSA-202ENST00000354880 IGKV1-13P0DP09 117 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms