RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 GAGE6Q13070 117 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 CARD17Q5XLA6 110 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 NPEPL1Q8NDH3 523 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 NANOS1Q8WY41 292 aaKnown RBP10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 RTBDNQ9BSG5 229 aaPredicted RBP10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 CLEC1BQ9P126 229 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 KCNS2Q9ULS6 477 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 HMGN4O00479 90 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 PLPP3O14495 311 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 DEDDO75618 318 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 CLDN15P56746 228 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 C9orf135Q5VTT2 229 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 LILRA6Q6PI73 481 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 ZNF562Q6V9R5 426 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 ZNF784Q8NCA9 323 aaPredicted RBP10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 OR2I1PQ8NGU4 316 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 OR5P2Q8WZ92 322 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 LRIT1Q9P2V4 623 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 SLC22A13Q9Y226 551 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 KLHDC2Q9Y2U9 406 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 TNRC6AQ8NDV7 1962 aaKnown RBP10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 IGLV3-16A0A075B6K0 115 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 PPIAL4EA0A075B759 164 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 IGHV2-26A0A0B4J1V2 119 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 SPINK4O60575 86 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 PPIAL4FP0DN26 164 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 CBLN1P23435 193 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 IL3RAP26951 378 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 MEF2CQ06413 473 aaPredicted RBP10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 HLA-DRB5Q30154 266 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 CLDND2Q8NHS1 167 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 SGMS2Q8NHU3 365 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 NUS1Q96E22 293 aa10.63□□□□□ -0.71
CTNNB1-201ENST00000349496 TEX48A0A1B0GUV7 120 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 SLC22A20A6NK97 555 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 HMGB3O15347 200 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 S1PR2O95136 353 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 FTH1P19P0C7X4 201 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 POLR2LP62875 67 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 SP6Q3SY56 376 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 TMEFF1Q8IYR6 380 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 FAM19A2Q8N3H0 131 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 OR10AC1Q8NH08 325 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 GNPNAT1Q96EK6 184 aaPredicted RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 RBM24Q9BX46 236 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 SRA1Q9HD15 236 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 ZNF581Q9P0T4 197 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 TRPM6Q9BX84 2022 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 TCF20Q9UGU0 1960 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 MDFIC2A0A1B0GVS7 189 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 HSBP1O75506 76 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 IGLC1P0CG04 106 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 CMPK1P30085 196 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 GPM6AP51674 278 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 FUT6P51993 359 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 NANOS3P60323 173 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 PMCHL1Q16048 86 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 ANXA2RQ3ZCQ2 193 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 GDF7Q7Z4P5 450 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 ADGRE4PQ86SQ3 457 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 PECRQ9BY49 303 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 SLC17A2O00624 439 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 CTSEP14091 401 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 KITLGP21583 273 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 CLDN2P57739 230 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 GGTA1PQ4G0N0 100 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 SLC25A34Q6PIV7 304 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 PFN4Q8NHR9 129 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 MRPL24Q96A35 216 aaKnown RBP10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 ZG16BQ96DA0 208 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 NEURL3Q96EH8 262 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 WDYHV1Q96HA8 205 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 LINC00470Q9BZP3 86 aa10.62□□□□□ -0.71
CTNNB1-201ENST00000349496 NXPH3O95157 252 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 PSG3Q16557 428 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 BADQ92934 168 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 LHX4Q969G2 390 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 RNF183Q96D59 192 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 RASL10BQ96S79 203 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 TIMP4Q99727 224 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 PLEKHF2Q9H8W4 249 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 A0A087WV48 116 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 LOC102723971A0A1B0GUV8 181 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 M0R2Z0 102 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 THBS3P49746 956 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 OR51A4Q8NGJ6 313 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 OR5C1Q8NGR4 320 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 FGF11Q92914 225 aa10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 WDR61Q9GZS3 305 aaKnown RBP10.61□□□□□ -0.71
CTNNB1-201ENST00000349496 SLC39A9Q9NUM3 307 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms