RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 LILRA5A6NI73 299 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
LRP8-202ENST00000347547 FASLGP48023 281 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 PSMB3P49720 205 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 RBM11P57052 281 aaKnown RBP13.42□□□□□ -0.26
LRP8-202ENST00000347547 RTP5Q14D33 572 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 SHBQ15464 509 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 SNAI3Q3KNW1 292 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 TMEM42Q69YG0 159 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
LRP8-202ENST00000347547 LHX4Q969G2 390 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 NABP1Q96AH0 204 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 BORCS8Q96FH0 119 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 OR2J1Q9GZK6 312 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 TIMM9Q9Y5J7 89 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 SLC22A20A6NK97 555 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 AQP7P3A6NL99 342 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 ZNF705FA8MVS1 300 aaPredicted RBP13.42□□□□□ -0.26
LRP8-202ENST00000347547 IFNL4K9M1U5 179 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 LILRA1O75019 489 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 GYPAP02724 150 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 UMODP07911 640 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
LRP8-202ENST00000347547 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
LRP8-202ENST00000347547 CD99P14209 185 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 DMRTA1Q5VZB9 504 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 FBXW9Q5XUX1 488 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 TMEM144Q7Z5S9 345 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 AGBL5Q8NDL9 886 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 PLK3Q9H4B4 646 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 TMEM106BQ9NUM4 274 aa13.42□□□□□ -0.26
LRP8-202ENST00000347547 SLC33A1O00400 549 aaPredicted RBP13.41□□□□□ -0.26
LRP8-202ENST00000347547 NXPH3O95157 252 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 FBLP22087 321 aaKnown RBP13.41□□□□□ -0.26
LRP8-202ENST00000347547 HBG1P69891 147 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 HBG2P69892 147 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 WDYHV1Q96HA8 205 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 WDR61Q9GZS3 305 aaKnown RBP13.41□□□□□ -0.26
LRP8-202ENST00000347547 ZNF442Q9H7R0 627 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 GPR27Q9NS67 375 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 SLC39A9Q9NUM3 307 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 ZFP30Q9Y2G7 519 aa13.41□□□□□ -0.26
LRP8-202ENST00000347547 H3BP45 60 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 WNT2P09544 360 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 DRD1P21728 446 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 IL3RAP26951 378 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 CD82P27701 267 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 EPHA8P29322 1005 aaPredicted RBP13.4□□□□□ -0.26
LRP8-202ENST00000347547 GFERP55789 205 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 TMEM256Q8N2U0 113 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 GPR146Q96CH1 333 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 PARD6AQ9NPB6 346 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 SELEP16581 610 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 PAFAH1B2P68402 229 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 DAZAP2Q15038 168 aaPredicted RBP13.4□□□□□ -0.26
LRP8-202ENST00000347547 TMEM183BQ1AE95 376 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 COL5A1-AS1Q5SY13 56 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 TPTE2P1Q5T6R2 138 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 TMEM92Q6UXU6 159 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 C16orf47Q6ZP98 133 aaPredicted RBP13.4□□□□□ -0.26
LRP8-202ENST00000347547 HAPLN4Q86UW8 402 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 WFIKKN1Q96NZ8 548 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 TRAPPC1Q9Y5R8 145 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 SHANK1Q9Y566 2161 aa13.4□□□□□ -0.26
LRP8-202ENST00000347547 IGKV1D-13A0A0B4J2D9 117 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 A0A0G2JRQ6 117 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 A0A1W2PNR3 127 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A10PA6NDY2 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A18PA6NE21 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A16PA6NEW6 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A20PA6NIJ5 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A8PA6NJQ4 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A7PA6NKC0 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A22PA8MWA6 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A12PA8MX19 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A5PA8MXJ8 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A23PA8MXZ1 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A15PP0C7V4 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A13PP0C7W8 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A14PP0C7W9 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 FAM90A24PP0C7X0 464 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 IGKV1-13P0DP09 117 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 ESDP10768 282 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 CRYGSP22914 178 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 WNT5AP41221 380 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 RPS18P62269 152 aaKnown RBP13.39□□□□□ -0.27
LRP8-202ENST00000347547 CLEC12BQ2HXU8 276 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 NUFIP2Q7Z417 695 aaKnown RBP13.39□□□□□ -0.27
LRP8-202ENST00000347547 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
LRP8-202ENST00000347547 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
LRP8-202ENST00000347547 AURKAIP1Q9NWT8 199 aaPredicted RBP13.39□□□□□ -0.27
LRP8-202ENST00000347547 MLNRO43193 412 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 CLDN17P56750 224 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 VCANP13611 3396 aa13.39□□□□□ -0.27
LRP8-202ENST00000347547 GON4LQ3T8J9 2241 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms