RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 LDLRAD3Q86YD5 345 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 H1FOOQ8IZA3 346 aaPredicted RBP9.13□□□□□ -0.95
ECM1-201ENST00000346569 NEU4Q8WWR8 484 aaPredicted RBP9.13□□□□□ -0.95
ECM1-201ENST00000346569 IGFBPL1Q8WX77 278 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 CORO2AQ92828 525 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 KIRREL1Q96J84 757 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 DLL4Q9NR61 685 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 KCNIP1Q9NZI2 227 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
ECM1-201ENST00000346569 KIAA2026Q5HYC2 2103 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 HBZP02008 142 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 PGAM2P15259 253 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 AKR1C4P17516 323 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 HLA-GP17693 338 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 PI3P19957 117 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 GNRHRP30968 328 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 P2RX3P56373 397 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 TAS2R31P59538 309 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 IL13RA1P78552 427 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 C2orf68Q2NKX9 166 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 C4orf46Q504U0 113 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 C6orf183Q5T699 404 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 LPCAT3Q6P1A2 487 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 TRAT1Q6PIZ9 186 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 LYPD2Q6UXB3 125 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 C12orf45Q8N5I9 185 aaPredicted RBP9.12□□□□□ -0.95
ECM1-201ENST00000346569 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 OR10J5Q8NHC4 309 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 MRGPRDQ8TDS7 321 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 MITD1Q8WV92 249 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 FYTTD1Q96QD9 318 aaKnown RBP9.12□□□□□ -0.95
ECM1-201ENST00000346569 TMEM246Q9BRR3 403 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 PLEKHF2Q9H8W4 249 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 RANGRFQ9HD47 186 aaPredicted RBP9.12□□□□□ -0.95
ECM1-201ENST00000346569 LAMP3Q9UQV4 416 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 OR2W1Q9Y3N9 320 aa9.12□□□□□ -0.95
ECM1-201ENST00000346569 CELSR2Q9HCU4 2923 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 TANC2Q9HCD6 1990 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 RAI1Q7Z5J4 1906 aaPredicted RBP9.11□□□□□ -0.95
ECM1-201ENST00000346569 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 BOLA2-SMG1P6H3BVE0 249 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 OVOL3O00110 214 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 SSNA1O43805 119 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 OR2A4O95047 310 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 SFT2D2O95562 160 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 DUS4LO95620 317 aaKnown RBP9.11□□□□□ -0.95
ECM1-201ENST00000346569 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
ECM1-201ENST00000346569 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 FXYD4P59646 89 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 HTD2P86397 168 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 TLE4Q04727 773 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 SLC38A6Q8IZM9 456 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 TCTE3Q8IZS6 198 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 ZNF565Q8N9K5 539 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 OR2AK2Q8NG84 335 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 TOMM40LQ969M1 308 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 ARL11Q969Q4 196 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 DACT3Q96B18 629 aaPredicted RBP9.11□□□□□ -0.95
ECM1-201ENST00000346569 GALMQ96C23 342 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 C14orf79Q96F83 325 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 ZNF486Q96H40 463 aaPredicted RBP9.11□□□□□ -0.95
ECM1-201ENST00000346569 PSMG3-AS1Q96PY0 264 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 OR2A7Q96R45 310 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 LINC00574Q9H8X3 128 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 OR6C3Q9NZP0 311 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 OR1A1Q9P1Q5 309 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 ZNF69Q9UC07 566 aa9.11□□□□□ -0.95
ECM1-201ENST00000346569 C14orf166Q9Y224 244 aaKnown RBP9.11□□□□□ -0.95
ECM1-201ENST00000346569 UNC79Q9P2D8 2635 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 A0A0B4J2A0 478 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 FAM172BPA6NC97 362 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 CRYM-AS1A6NIL9 109 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 DBX1A6NMT0 343 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 A8MV72 311 aaPredicted RBP9.1□□□□□ -0.95
ECM1-201ENST00000346569 F2RL2O00254 374 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 IGHV2-70P01814 119 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 CEACAM6P40199 344 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 HERV-K104P61576 105 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 RND3P61587 244 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 CD83Q01151 205 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 EDDM3AQ14507 147 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 KCNJ8Q15842 424 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 C17orf58Q2M2W7 97 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 SP5Q6BEB4 398 aaPredicted RBP9.1□□□□□ -0.95
ECM1-201ENST00000346569 FGFRL1Q8N441 504 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 RFESDQ8TAC1 157 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 UBALD1Q8TB05 177 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 IL1F10Q8WWZ1 152 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 GALNT14Q96FL9 552 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 UBTD1Q9HAC8 227 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 PIPOXQ9P0Z9 390 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 TEX15Q9BXT5 2789 aa9.1□□□□□ -0.95
ECM1-201ENST00000346569 HRNRQ86YZ3 2850 aaPredicted RBP9.09□□□□□ -0.95
ECM1-201ENST00000346569 NKX6-3A6NJ46 265 aa9.09□□□□□ -0.95
ECM1-201ENST00000346569 SPINT2O43291 252 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms