RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 GPM6AP51674 278 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 RAC3P60763 192 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 RPS4XP62701 263 aaKnown RBP13.55□□□□□ -0.24
SRPK1-201ENST00000346162 GFI1BQ5VTD9 330 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 OR10G4Q8NGN3 311 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 OR10G9Q8NGN4 311 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 OR10G7Q8NGN6 311 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 PTX4Q96A99 478 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 PIN1P1O15428 100 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 UBE2G1P62253 170 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 GGTLC2Q14390 218 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 SPATA46Q5T0L3 261 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 SMIM8Q96KF7 97 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 C3orf85A0A1B0GTC6 90 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 TBX6O95947 436 aaPredicted RBP13.55□□□□□ -0.24
SRPK1-201ENST00000346162 TFPI2P48307 235 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 SSPNQ14714 243 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 ERGIC1Q969X5 290 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 NUDT11Q96G61 164 aa13.55□□□□□ -0.24
SRPK1-201ENST00000346162 SCARF2Q96GP6 870 aaPredicted RBP13.55□□□□□ -0.24
SRPK1-201ENST00000346162 A6NDN8 102 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 ASAH2BP0C7U1 165 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 H1FOOQ8IZA3 346 aaPredicted RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 CISD2Q8N5K1 135 aaKnown RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 FAAP24Q9BTP7 215 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 WDR61Q9GZS3 305 aaKnown RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 C11orf94C9JXX5 98 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 CHST1O43916 411 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 IL2RAP01589 272 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 KLF3P57682 345 aaPredicted RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 TMEM208Q9BTX3 173 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 KLHDC2Q9Y2U9 406 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 HOXA6P31267 233 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 PPOXP50336 477 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 NHLH1Q02575 133 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 OR1L6Q8NGR2 347 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 DPF1Q92782 380 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF501Q96CX3 271 aaPredicted RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 HIST1H2BLQ99880 126 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF430Q9H8G1 570 aaPredicted RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 MANBALQ9NQG1 85 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 PDCD11Q14690 1871 aaKnown RBP13.54□□□□□ -0.24
SRPK1-201ENST00000346162 TRGV5A0A0B4J1U4 118 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 A0A0G2JK05 382 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 DEDDO75618 318 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 CRYAAP02489 173 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 C1orf210Q8IVY1 113 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 RNF133Q8WVZ7 376 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF665Q9H7R5 613 aa13.54□□□□□ -0.24
SRPK1-201ENST00000346162 PSME4Q14997 1843 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF236Q9UL36 1845 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 IGHV5-10-1A0A0J9YXX1 117 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 RAMP1O60894 148 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 RPS16P62249 146 aaKnown RBP13.53□□□□□ -0.24
SRPK1-201ENST00000346162 LSM6P62312 80 aaKnown RBP13.53□□□□□ -0.24
SRPK1-201ENST00000346162 EIF3IQ13347 325 aaKnown RBP13.53□□□□□ -0.24
SRPK1-201ENST00000346162 GAB4Q2WGN9 574 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 ST6GALNAC3Q8NDV1 305 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 CTHRC1Q96CG8 243 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 SCN2AQ99250 2005 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
SRPK1-201ENST00000346162 MT-CO3P00414 261 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 TCL1AP56279 114 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 HIST3H2BBQ8N257 126 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 BEND2Q8NDZ0 799 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 FGF16O43320 207 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 CTSBP07858 339 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 PRSS12P56730 875 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 C12orf54Q6X4T0 127 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 MIEN1Q9BRT3 115 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 PROCRQ9UNN8 238 aa13.53□□□□□ -0.24
SRPK1-201ENST00000346162 GNG3P63215 75 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 ZNF718Q3SXZ3 478 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 PRAMEF5Q5TYX0 476 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 PRAMEF6Q5VXH4 476 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 NIT1Q86X76 327 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 GINS3Q9BRX5 216 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 RLFQ13129 1914 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 FHL5Q5TD97 284 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 RBMXL3Q8N7X1 1067 aaKnown RBP13.52□□□□□ -0.24
SRPK1-201ENST00000346162 PARLQ9H300 379 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 GPR132Q9UNW8 380 aa13.52□□□□□ -0.24
SRPK1-201ENST00000346162 PAGE4O60829 102 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 RHBDL1O75783 438 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 IFI6P09912 130 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 COL10A1Q03692 680 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 HEPN1Q6WQI6 88 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 SH3BGRL3Q9H299 93 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 GREB1Q4ZG55 1949 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 CDS2O95674 445 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 RPS4Y1P22090 263 aaKnown RBP13.52□□□□□ -0.25
SRPK1-201ENST00000346162 HIKESHIQ53FT3 197 aa13.52□□□□□ -0.25
SRPK1-201ENST00000346162 A0A1W2PPC1 479 aa13.51□□□□□ -0.25
SRPK1-201ENST00000346162 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
SRPK1-201ENST00000346162 CAMPP49913 170 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms