RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 ZNF497Q6ZNH5 498 aa13.07□□□□□ -0.32
UPF3B-202ENST00000345865 TMEM182Q6ZP80 229 aaPredicted RBP13.07□□□□□ -0.32
UPF3B-202ENST00000345865 C19orf12Q9NSK7 152 aa13.07□□□□□ -0.32
UPF3B-202ENST00000345865 RNF115Q9Y4L5 304 aa13.07□□□□□ -0.32
UPF3B-202ENST00000345865 J3QW42 95 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 CHST1O43916 411 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 CST7O76096 145 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 AGFG2O95081 481 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 IGKV1-39P01597 117 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 IGKV1D-39P04432 117 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 KIR2DL2P43627 348 aaPredicted RBP13.06□□□□□ -0.32
UPF3B-202ENST00000345865 CAMLGP49069 296 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 CEBPDP49716 269 aaPredicted RBP13.06□□□□□ -0.32
UPF3B-202ENST00000345865 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 Q6ZRM9 215 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 Q6ZT83 130 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 ZNF295-AS1Q8N0V1 137 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 OR10V1Q8NGI7 309 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 ABHD14AQ9BUJ0 271 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 PLEKHF2Q9H8W4 249 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 LUZP4Q9P127 313 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 IQCF6A8MYZ5 107 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.06□□□□□ -0.32
UPF3B-202ENST00000345865 GRPP07492 148 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 EPHA1P21709 976 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 ATP6V0CP27449 155 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 MRPL49Q13405 166 aaKnown RBP13.06□□□□□ -0.32
UPF3B-202ENST00000345865 CNEP1R1Q8N9A8 125 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 OR5C1Q8NGR4 320 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 IL22RA2Q969J5 263 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 SVILO95425 2214 aa13.06□□□□□ -0.32
UPF3B-202ENST00000345865 INTS1Q8N201 2190 aaKnown RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 CACNA1GO43497 2377 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 KIAA1324LA8MWY0 1029 aaPredicted RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 NPIPB11E5RHQ5 1161 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 K7N7A8 449 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 PITX3O75364 302 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 PRH1P02810 166 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 RAC2P15153 192 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 PVALBP20472 110 aaPredicted RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 CD82P27701 267 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 PPT1P50897 306 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 ZNF146Q15072 292 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 C9orf106Q8NAJ2 232 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 TINAGQ9UJW2 476 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 A0A1B0GV50 99 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 MLNRO43193 412 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 NXPH2O95156 264 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 PPP1CCP36873 323 aaKnown RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 DYNLT3P51808 116 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 FOXF2Q12947 444 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 GUK1Q16774 197 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 IGFL2Q6UWQ7 119 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 CXorf67Q86X51 503 aaPredicted RBP13.05□□□□□ -0.32
UPF3B-202ENST00000345865 TMEM217Q8N7C4 229 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 WDR31Q8NA23 367 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 ABHD14BQ96IU4 210 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 TREM2Q9NZC2 230 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 TRAPPC2LQ9UL33 140 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 POLDIP2Q9Y2S7 368 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 CACNA1DQ01668 2161 aa13.05□□□□□ -0.32
UPF3B-202ENST00000345865 PSPNO60542 156 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 VAMP2P63027 116 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 INO80CQ6PI98 192 aaPredicted RBP13.04□□□□□ -0.32
UPF3B-202ENST00000345865 ZNF826PQ6ZT77 177 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 Q8IYB0 196 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 MBNL3Q9NUK0 354 aaKnown RBP13.04□□□□□ -0.32
UPF3B-202ENST00000345865 NDRG3Q9UGV2 375 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 PPP1R3CQ9UQK1 317 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 MGAQ8IWI9 3026 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 WNT9BO14905 357 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 MDH2P40926 338 aaKnown RBP13.04□□□□□ -0.32
UPF3B-202ENST00000345865 RAB5CP51148 216 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
UPF3B-202ENST00000345865 C11orf53Q8IXP5 236 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
UPF3B-202ENST00000345865 IGKV3-15P01624 115 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 TFF1P04155 84 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 HEXAP06865 529 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 SERPINE2P07093 398 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 ZNF266Q14584 549 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 OR8G1Q15617 311 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 SHEQ5VZ18 495 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 OR2G3Q8NGZ4 309 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 SLC25A31Q9H0C2 315 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 OR14J1Q9UGF5 321 aa13.03□□□□□ -0.32
UPF3B-202ENST00000345865 STRAPQ9Y3F4 350 aaKnown RBP13.03□□□□□ -0.32
UPF3B-202ENST00000345865 H3BP45 60 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 COX5AP20674 150 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 AKR1C3P42330 323 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 CCL20P78556 96 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 RUNX1Q01196 453 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 ZNF585BQ52M93 769 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 EIF5A2Q9GZV4 153 aaKnown RBP13.02□□□□□ -0.32
UPF3B-202ENST00000345865 FZR1Q9UM11 496 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 WIPI2Q9Y4P8 454 aa13.02□□□□□ -0.32
UPF3B-202ENST00000345865 MEX3AA1L020 520 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms