RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 DCTN5Q9BTE1 182 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 ZNF275Q9NSD4 429 aaPredicted RBP13.2□□□□□ -0.3
CUL3-202ENST00000344951 HLA-DRB3P79483 266 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 CD226Q15762 336 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 TMEM255AQ5JRV8 349 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 SMPD2O60906 423 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 CTSVO60911 334 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 MPDU1O75352 247 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 COL10A1Q03692 680 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 SLC25A10Q9UBX3 287 aaPredicted RBP13.2□□□□□ -0.3
CUL3-202ENST00000344951 TRAV8-7A0A075B6U6 113 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 CD74P04233 296 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 ZNF273Q14593 569 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 MRGPRFQ96AM1 343 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 ZNF665Q9H7R5 613 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 RNF7Q9UBF6 113 aa13.2□□□□□ -0.3
CUL3-202ENST00000344951 HEXA-AS1Q9H8Q6 139 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 MRPS18BQ9Y676 258 aaKnown RBP13.19□□□□□ -0.3
CUL3-202ENST00000344951 SUMO3P55854 103 aaPredicted RBP13.19□□□□□ -0.3
CUL3-202ENST00000344951 RELBQ01201 579 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 SLC25A40Q8TBP6 338 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 OR51B2Q9Y5P1 312 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 SLX4Q8IY92 1834 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 IGHV3-66A0A0C4DH42 116 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 IGHV3-23P01764 117 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 HOXC4P09017 264 aaPredicted RBP13.19□□□□□ -0.3
CUL3-202ENST00000344951 PGA3P0DJD8 388 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 IL13RA2Q14627 380 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 SLC25A53Q5H9E4 307 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 CLEC18BQ6UXF7 455 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 ZNF383Q8NA42 475 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 PERPQ96FX8 193 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 HSPB8Q9UJY1 196 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 ASCC3Q8N3C0 2202 aaKnown RBP13.19□□□□□ -0.3
CUL3-202ENST00000344951 A0A087X0M5 115 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 A0A1B0GX30 115 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 GP1BAP07359 652 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 CT62P0C5K7 136 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 LHX9Q9NQ69 397 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 DUXBA0A1W2PPF3 345 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 TCF21O43680 179 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 NUP205Q92621 2012 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 FRRS1LQ9P0K9 344 aa13.19□□□□□ -0.3
CUL3-202ENST00000344951 MAS1LP35410 378 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 A0A1B0GU03 582 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 H3BTX0 84 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 GPR6P46095 362 aaPredicted RBP13.18□□□□□ -0.3
CUL3-202ENST00000344951 SCAND1P57086 179 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 ATG101Q9BSB4 218 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
CUL3-202ENST00000344951 CA10Q9NS85 328 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 HIGD1AQ9Y241 93 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 BTAF1O14981 1849 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 STAG3L2P0CL84 134 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 KLF9Q13886 244 aaPredicted RBP13.18□□□□□ -0.3
CUL3-202ENST00000344951 OPN3Q9H1Y3 402 aaPredicted RBP13.18□□□□□ -0.3
CUL3-202ENST00000344951 GHITMQ9H3K2 345 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 IGHV3-35A0A0C4DH35 117 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 TRDCB7Z8K6 153 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 IRF3Q14653 427 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 WDR34Q96EX3 536 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 TMEM167BQ9NRX6 74 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 PLPP3O14495 311 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 COTL1Q14019 142 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
CUL3-202ENST00000344951 OR4A47Q6IF82 309 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 ADAD2Q8NCV1 583 aaKnown RBP13.18□□□□□ -0.3
CUL3-202ENST00000344951 CCL13Q99616 98 aa13.18□□□□□ -0.3
CUL3-202ENST00000344951 TRPM3Q9HCF6 1732 aaPredicted RBP13.17□□□□□ -0.3
CUL3-202ENST00000344951 SOCS1O15524 211 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 REG1AP05451 166 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 DLK1P80370 383 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 LDLRAD4O15165 306 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 OGG1O15527 345 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 PDCD6O75340 191 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 CTLA4P16410 223 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 COL9A1P20849 921 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 GPR35Q9HC97 309 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
CUL3-202ENST00000344951 PSG2P11465 335 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 CALHM1Q8IU99 346 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 TSPAN13O95857 204 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 OR2T10Q8NGZ9 312 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 OPN4Q9UHM6 478 aa13.17□□□□□ -0.3
CUL3-202ENST00000344951 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
CUL3-202ENST00000344951 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 IGHV1OR21-1A0A087WYE8 117 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 ZNF735P0CB33 412 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 CRHP06850 196 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 NXPH1P58417 271 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 KHDC3LQ587J8 217 aa13.16□□□□□ -0.3
CUL3-202ENST00000344951 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms