RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KCNK15Q9H427 330 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 MED9Q9NWA0 146 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 PUS1Q9Y606 427 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 GAPDHP04406 335 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 FBP1P09467 338 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 TAGLNQ01995 201 aaKnown RBP14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 TICRRQ7Z2Z1 1910 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 C1orf196B1AJZ1 125 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 RAB29O14966 203 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 LALBAP00709 142 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 PPYP01298 95 aa14.14□□□□□ -0.15
SMARCA4-201ENST00000344626 NYNRINQ9P2P1 1898 aaKnown RBP14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 CECR9P0C854 216 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 MPV17P39210 176 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 RAB5CP51148 216 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 SLC16A12Q6ZSM3 486 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 TBC1D26Q86UD7 250 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 AAMDCQ9H7C9 122 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 HILPDAQ9Y5L2 63 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 OR5AC1P0C628 307 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 FAM122CQ6P4D5 195 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 SS18L1O75177 396 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 HARBI1Q96MB7 349 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 TPPP3Q9BW30 176 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 H3BP45 60 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 CYB5R3P00387 301 aaPredicted RBP14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 FAM106CPP0CH98 169 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 OR4F17Q8NGA8 305 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 OR4F5Q8NH21 305 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 OR4F4Q96R69 305 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 FAM206AQ9NX38 181 aa14.13□□□□□ -0.15
SMARCA4-201ENST00000344626 ANKRD36A6QL64 1941 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 SPTBN4Q9H254 2564 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 C9orf170A2RU37 121 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 SPRR3Q9UBC9 169 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 XKRY2A2RUG3 117 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 NQO2P16083 231 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 PPP1R1AQ13522 171 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 ETV3LQ6ZN32 361 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 DRAXINQ8NBI3 349 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 UBE2L5PA0A1B0GUS4 154 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 LOC390937A0A1W2PQ73 354 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 SYNGR1O43759 233 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 TAGLN2P37802 199 aaKnown RBP14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 MMDQ15546 238 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 C20orf24Q9BUV8 137 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 SIRT7Q9NRC8 400 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 TRBV5-5A0A0J9YX44 114 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 Q0VFX4 171 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 PEAR1Q5VY43 1037 aaPredicted RBP14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 SLC25A42Q86VD7 318 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 OR5R1Q8NH85 324 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 ABHD14AQ9BUJ0 271 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 ZNF835Q9Y2P0 537 aa14.12□□□□□ -0.15
SMARCA4-201ENST00000344626 DVL1O14640 695 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 OR2H2O95918 312 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 MC5RP33032 325 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 DVL1P1P54792 670 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 DHRS2Q13268 280 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 TMEM30BQ3MIR4 351 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 LCN15Q6UWW0 184 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 TMEM104Q8NE00 496 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 BCL2L2Q92843 193 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 AMELYQ99218 206 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 DNASE2O00115 360 aaPredicted RBP14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 OPN1MWP04001 364 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 OPN1MW2P0DN77 364 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 OPN1MW3P0DN78 364 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 ATP6V1FQ16864 119 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 TMEM91Q6ZNR0 172 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 LSM2Q9Y333 95 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 HEATR1Q9H583 2144 aaKnown RBP14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 LOC105371242A0A075B767 164 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 ST6GALNAC3Q8NDV1 305 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 FAM3AP98173 230 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 ABLIM2Q6H8Q1 611 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 ZNF561Q8N587 486 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 MARC2Q969Z3 335 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 PITPNC1Q9UKF7 332 aa14.11□□□□□ -0.15
SMARCA4-201ENST00000344626 GGNBP1Q5YKI7 109 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 GAPTQ8N292 157 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 PPIAL4CA0A0B4J2A2 164 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 PPIAL4GP0DN37 164 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 REG1BP48304 166 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 SLC38A11Q08AI6 406 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 FAM122BQ7Z309 247 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 CST7O76096 145 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 ZNF787Q6DD87 383 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 HOGA1Q86XE5 327 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 BPIFCQ8NFQ6 507 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 CLN5O75503 358 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 PRB1P04280 392 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 SLC35B1P78383 322 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 FOXB2Q5VYV0 432 aa14.1□□□□□ -0.15
SMARCA4-201ENST00000344626 CCL28Q9NRJ3 127 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms