RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 KCNS2Q9ULS6 477 aa12.64□□□□□ -0.39
VIPAS39-202ENST00000343765 PTPRZ1P23471 2315 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 H0Y980 276 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 SERPINE2P07093 398 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 F2RP25116 425 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 SNCAP37840 140 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF154Q13106 437 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 MRPL49Q13405 166 aaKnown RBP12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 HFEQ30201 348 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 OR5C1Q8NGR4 320 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 KIAA2026Q5HYC2 2103 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 PIEZO2Q9H5I5 2752 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 FAM157AC9JC47 383 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 CHST1O43916 411 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 PPP1CCP36873 323 aaKnown RBP12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 GUK1Q16774 197 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 H1FOOQ8IZA3 346 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 ABHD14AQ9BUJ0 271 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 PLEKHF2Q9H8W4 249 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 LYRM2Q9NU23 88 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 MLXQ9UH92 298 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 FZR1Q9UM11 496 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF175Q9Y473 711 aa12.63□□□□□ -0.39
VIPAS39-202ENST00000343765 LRP5LA4QPB2 252 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 CDRT15L2A8MXV6 281 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 WT1P19544 449 aaPredicted RBP12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 S100GP29377 79 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 MPV17P39210 176 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 DYNLT3P51808 116 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 OR5D13Q8NGL4 314 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 LYPD6BQ8NI32 183 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 SAV1Q9H4B6 383 aaPredicted RBP12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 TINAGQ9UJW2 476 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 FBXO7Q9Y3I1 522 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 GPR37O15354 613 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 PSG7Q13046 419 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 OR10V1Q8NGI7 309 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 BCL2L14Q9BZR8 327 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 TAAR3PQ9P1P4 343 aa12.62□□□□□ -0.39
VIPAS39-202ENST00000343765 TFF1P04155 84 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 RUNX1Q01196 453 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF880Q6PDB4 577 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 GTF3AQ92664 365 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 C20orf24Q9BUV8 137 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 OBP2BQ9NPH6 170 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 CLCF1Q9UBD9 225 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 NDRG3Q9UGV2 375 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 GTF3C1Q12789 2109 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 PITX3O75364 302 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 CNOT4O95628 575 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 UCP2P55851 309 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF266Q14584 549 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 OR8G1Q15617 311 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF826PQ6ZT77 177 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 FAM214BQ7L5A3 538 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 GPR146Q96CH1 333 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 SLC25A31Q9H0C2 315 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 POLDIP2Q9Y2S7 368 aa12.61□□□□□ -0.39
VIPAS39-202ENST00000343765 TRBV6-6A0A0A6YYG2 114 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 MEX3AA1L020 520 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 WNT9BO14905 357 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 WDR1O75083 606 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 FTH1P19P0C7X4 201 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 TESK1Q15569 626 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 ODF3L1Q8IXM7 274 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 AIFM2Q9BRQ8 373 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 CABLES2Q9BTV7 478 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 ICE1Q9Y2F5 2266 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 ID3Q02535 119 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 GABRA6Q16445 453 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 ZNF497Q6ZNH5 498 aa12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
VIPAS39-202ENST00000343765 HOXC12P31275 282 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 PEA15Q15121 130 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 ALKBH2Q6NS38 261 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 KLF14Q8TD94 323 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 RPS10P5Q9NQ39 176 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 DUXBA0A1W2PPF3 345 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 K7N7A8 449 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 PGA5P0DJD9 388 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 ERVK11-1P61568 191 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 FAM53AQ6NSI3 398 aaPredicted RBP12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 Q6ZRM9 215 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 RXFP4Q8TDU9 374 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 PARD6AQ9NPB6 346 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
VIPAS39-202ENST00000343765 A6NLC8 198 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms