RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 NPTNQ9Y639 398 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 ESPL1Q14674 2120 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 LYPD3O95274 346 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 SCGB1D1O95968 90 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 SCTP09683 121 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 SHISA5Q8N114 240 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 OR2V2Q96R30 315 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 PSG2P11465 335 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 CTSSP25774 331 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 SSX8Q7RTT4 187 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 ZNF429Q86V71 674 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 TMEM14DPA8MWL7 114 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 RPL31P62899 125 aaKnown RBP13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 BTNL8Q6UX41 500 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 MDC1Q14676 2089 aaKnown RBP13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 COL6A6A6NMZ7 2263 aa13.49□□□□□ -0.25
CARMIL3-201ENST00000342740 A0A1W2PPQ1 181 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 TSTD3H0UI37 97 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 MGST3O14880 152 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 OR2H2O95918 312 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 ZNF154Q13106 437 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FNDC7Q5VTL7 733 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 SLC25A22Q9H936 323 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 A0A1W2PN81 502 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 C9orf172C9J069 976 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 DVL1O14640 695 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 NQO2P16083 231 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 CHRNA7P36544 502 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 RSPO4Q2I0M5 234 aaPredicted RBP13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM131CQ96AQ9 280 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 NPDC1Q9NQX5 325 aaPredicted RBP13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 TUBG2Q9NRH3 451 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 AMMECR1Q9Y4X0 333 aaPredicted RBP13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 PPIAL4EA0A075B759 164 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A10PA6NDY2 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A18PA6NE21 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A16PA6NEW6 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A20PA6NIJ5 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A8PA6NJQ4 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A7PA6NKC0 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A22PA8MWA6 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A12PA8MX19 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A5PA8MXJ8 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A23PA8MXZ1 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 PPIAL4DF5H284 164 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 CLN5O75503 358 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 RBP4P02753 201 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A15PP0C7V4 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A13PP0C7W8 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A14PP0C7W9 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 FAM90A24PP0C7X0 464 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 PPIAL4FP0DN26 164 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 TMEM50BP56557 158 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 OR8G5Q8NG78 346 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 LINC00470Q9BZP3 86 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 HSF4Q9ULV5 492 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 PPIAL4AQ9Y536 164 aa13.48□□□□□ -0.25
CARMIL3-201ENST00000342740 GFRA3O60609 400 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 G6PCP35575 357 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 SLC25A53Q5H9E4 307 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 TGIF2LYQ8IUE0 185 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 TGIF2LXQ8IUE1 241 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 OR8B3Q8NGG8 313 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 OR10G9Q8NGN4 311 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 OR10G7Q8NGN6 311 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 KLF14Q8TD94 323 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 OR8B2Q96RD0 313 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 A0A1B0GU03 582 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 NPIPB7O75200 414 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 KLF7O75840 302 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 CLDN14O95500 239 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 ZNF439Q8NDP4 499 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 PKIBQ9C010 78 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 LOC390937A0A1W2PQ73 354 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 CD200P41217 278 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 EWSR1Q01844 656 aaKnown RBP eCLIP13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 PRR27Q6MZM9 219 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 ZDHHC16Q969W1 377 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 Q96M66 194 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 SDHCQ99643 169 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 TNFSF18Q9UNG2 199 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 POMT1Q9Y6A1 747 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 V9GYS6 101 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 HSD17B13Q7Z5P4 300 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 ATP5SQ99766 215 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 OR1A1Q9P1Q5 309 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 CLN8Q9UBY8 286 aa13.47□□□□□ -0.25
CARMIL3-201ENST00000342740 THADAQ6YHU6 1953 aa13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 A0A0G2JK05 382 aa13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 CDC34P49427 236 aaPredicted RBP13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 RPS11P62280 158 aaKnown RBP eCLIP13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 OR5B3Q8NH48 314 aa13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 OR2T6Q8NHC8 308 aa13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.25
CARMIL3-201ENST00000342740 PIPOXQ9P0Z9 390 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms