RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 COL10A1Q03692 680 aa19.12■□□□□ 0.65
TRIM28-202ENST00000341753 CLEC18CQ8NCF0 446 aa19.12■□□□□ 0.65
TRIM28-202ENST00000341753 SCGB1C1Q8TD33 95 aa19.12■□□□□ 0.65
TRIM28-202ENST00000341753 RCC1LQ96I51 464 aaKnown RBP19.12■□□□□ 0.65
TRIM28-202ENST00000341753 OR2H1Q9GZK4 316 aa19.12■□□□□ 0.65
TRIM28-202ENST00000341753 AMBPP02760 352 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 CCL2P13500 99 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 APLNRP35414 380 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 ERVS71-1P61550 626 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 RBKSQ9H477 322 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 PLK3Q9H4B4 646 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 PITPNC1Q9UKF7 332 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 COLQQ9Y215 455 aaPredicted RBP19.11■□□□□ 0.65
TRIM28-202ENST00000341753 ZNF705GA8MUZ8 300 aaPredicted RBP19.11■□□□□ 0.65
TRIM28-202ENST00000341753 DFFBO76075 338 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 GZMBP10144 247 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 GPM6AP51674 278 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 TAS2R60P59551 318 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 OR1K1Q8NGR3 316 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 OR2V1Q8NHB1 315 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 FGF23Q9GZV9 251 aaPredicted RBP19.11■□□□□ 0.65
TRIM28-202ENST00000341753 OR14J1Q9UGF5 321 aa19.11■□□□□ 0.65
TRIM28-202ENST00000341753 P2RY6Q15077 328 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 DPPA3Q6W0C5 159 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 ABHD14BQ96IU4 210 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 LAMP3Q9UQV4 416 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 DSCR4P56555 118 aaPredicted RBP19.1■□□□□ 0.65
TRIM28-202ENST00000341753 PNRC1Q12796 327 aaPredicted RBP19.1■□□□□ 0.65
TRIM28-202ENST00000341753 C20orf204Q6ZNR8 217 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 OR10A7Q8NGE5 316 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 OR5D13Q8NGL4 314 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 OR10G4Q8NGN3 311 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 FOXB1Q99853 325 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 CDH20Q9HBT6 801 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 KIAA2026Q5HYC2 2103 aa19.1■□□□□ 0.65
TRIM28-202ENST00000341753 IGHV1-45A0A0A0MS14 117 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 TRAV1-1A0A0B4J248 108 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 C9orf135Q5VTT2 229 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 AAED1Q7RTV5 226 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 C16orf82Q7Z2V1 217 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 ZNF664Q8N3J9 261 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 GPR179Q6PRD1 2367 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 TRBV24-1A0A075B6N3 115 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 A0A1W2PR80 420 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 KLF7O75840 302 aaPredicted RBP19.09■□□□□ 0.65
TRIM28-202ENST00000341753 NAPSAO96009 420 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 RTP5Q14D33 572 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 SSX2Q16385 188 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 ARHGAP21Q5T5U3 1957 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 TMEM183AQ8IXX5 376 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 OR56B2PQ8NGI1 322 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 ZNF488Q96MN9 340 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 CACNG5Q9UF02 275 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 TRAV39A0A0B4J263 110 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 H0Y980 276 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 OPN1MWP04001 364 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 SERPINE2P07093 398 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 OPN1MW2P0DN77 364 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 OPN1MW3P0DN78 364 aa19.09■□□□□ 0.65
TRIM28-202ENST00000341753 RPUSD4Q96CM3 377 aaKnown RBP19.09■□□□□ 0.65
TRIM28-202ENST00000341753 A0A0G2JMM0 328 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 A0A1W2PPB8 328 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 A0A1W2PRS3 328 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 KIR3DP1A8MWS1 328 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 TUSC2O75896 110 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 COX6A1P12074 109 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 F2RP25116 425 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 HAPLN4Q86UW8 402 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 LILRB2Q8N423 598 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 CPEB3Q8NE35 698 aaKnown RBP19.08■□□□□ 0.65
TRIM28-202ENST00000341753 UBALD1Q8TB05 177 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 IL1F10Q8WWZ1 152 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 SMIM7Q9BQ49 75 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 ELOVL1Q9BW60 279 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 TMEM242Q9NWH2 141 aa19.08■□□□□ 0.65
TRIM28-202ENST00000341753 HS3ST1O14792 307 aa19.08■□□□□ 0.64
TRIM28-202ENST00000341753 CXCL13O43927 109 aa19.08■□□□□ 0.64
TRIM28-202ENST00000341753 CNOT4O95628 575 aaKnown RBP19.08■□□□□ 0.64
TRIM28-202ENST00000341753 FGF5P12034 268 aa19.08■□□□□ 0.64
TRIM28-202ENST00000341753 GZMHP20718 246 aa19.08■□□□□ 0.64
TRIM28-202ENST00000341753 JOSD1Q15040 202 aaPredicted RBP19.08■□□□□ 0.64
TRIM28-202ENST00000341753 OR5R1Q8NH85 324 aa19.08■□□□□ 0.64
TRIM28-202ENST00000341753 KIAA1324LA8MWY0 1029 aaPredicted RBP19.07■□□□□ 0.64
TRIM28-202ENST00000341753 IFNA10P01566 189 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 FOXO1Q12778 655 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 TGIF2LXQ8IUE1 241 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 NCOR1O75376 2440 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 XKRY2A2RUG3 117 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 MAP1LC3B2A6NCE7 125 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 RAC1P63000 192 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 OR8G1Q15617 311 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 ZNF525Q8N782 197 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 OR1P1Q8NH06 330 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 RDH5Q92781 318 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 HIST1H2AAQ96QV6 131 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 MAP1LC3BQ9GZQ8 125 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 PSENENQ9NZ42 101 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 MTCH1Q9NZJ7 389 aa19.07■□□□□ 0.64
TRIM28-202ENST00000341753 ERRFI1Q9UJM3 462 aaPredicted RBP19.07■□□□□ 0.64
TRIM28-202ENST00000341753 DUXBA0A1W2PPF3 345 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms