RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 MKKSQ9NPJ1 570 aaPredicted RBP10.23□□□□□ -0.77
RTN3-203ENST00000341307 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 TP53TG3Q9ULZ0 132 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 KIF26BQ2KJY2 2108 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 ASCC3Q8N3C0 2202 aaKnown RBP10.23□□□□□ -0.77
RTN3-203ENST00000341307 OR5B21A6NL26 309 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 ARPC3O15145 178 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 CSNK1A1P48729 337 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 RPL15P61313 204 aaKnown RBP10.23□□□□□ -0.77
RTN3-203ENST00000341307 SLC25A44Q96H78 314 aaPredicted RBP10.23□□□□□ -0.77
RTN3-203ENST00000341307 HSPB9Q9BQS6 159 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 DUSP23Q9BVJ7 150 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 HIPK2Q9H2X6 1198 aa10.23□□□□□ -0.77
RTN3-203ENST00000341307 CISD1Q9NZ45 108 aaKnown RBP10.23□□□□□ -0.77
RTN3-203ENST00000341307 PROB1E7EW31 1015 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 SDCBPO00560 298 aaPredicted RBP10.22□□□□□ -0.77
RTN3-203ENST00000341307 SCRG1O75711 98 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 MPZL1O95297 269 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 IL12BP29460 328 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 QRFPP83859 136 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 SQSTM1Q13501 440 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 RTP5Q14D33 572 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 HLA-DQA1Q5Y7H0 255 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 FDX2Q6P4F2 183 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 FBXL14Q8N1E6 418 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 OR6N2Q8NGY6 317 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 ZNF519Q8TB69 540 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 DAZLQ92904 295 aaKnown RBP10.22□□□□□ -0.77
RTN3-203ENST00000341307 REEP6Q96HR9 211 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 ZNF160Q9HCG1 818 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 COPS7AQ9UBW8 275 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 B3GALT5Q9Y2C3 310 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 TNRC6BQ9UPQ9 1833 aaKnown RBP10.22□□□□□ -0.77
RTN3-203ENST00000341307 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 ZNF814B7Z6K7 855 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 H7BYZ3 331 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 CDS2O95674 445 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 LGALS7P47929 136 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 EWSR1Q01844 656 aaKnown RBP eCLIP10.22□□□□□ -0.77
RTN3-203ENST00000341307 PLCXD2Q0VAA5 305 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 OTPQ5XKR4 325 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 RHBDD2Q6NTF9 364 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 MCEMP1Q8IX19 187 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 OR5B12Q96R08 314 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 NICN1Q9BSH3 213 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 OCIAD1Q9NX40 245 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 BET1LQ9NYM9 111 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 ELOVL5Q9NYP7 299 aa10.22□□□□□ -0.77
RTN3-203ENST00000341307 A0A1W2PRS3 328 aa10.21□□□□□ -0.77
RTN3-203ENST00000341307 ZFP92A6NM28 416 aa10.21□□□□□ -0.77
RTN3-203ENST00000341307 CDX4O14627 284 aaPredicted RBP10.21□□□□□ -0.77
RTN3-203ENST00000341307 MSTNO14793 375 aa10.21□□□□□ -0.77
RTN3-203ENST00000341307 BCL2P10415 239 aa10.21□□□□□ -0.77
RTN3-203ENST00000341307 EGR4Q05215 589 aa10.21□□□□□ -0.77
RTN3-203ENST00000341307 OR2T10Q8NGZ9 312 aa10.21□□□□□ -0.77
RTN3-203ENST00000341307 EMG1Q92979 244 aaKnown RBP10.21□□□□□ -0.77
RTN3-203ENST00000341307 SRA1Q9HD15 236 aaKnown RBP10.21□□□□□ -0.77
RTN3-203ENST00000341307 MPDZO75970 2070 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 CORTO00230 105 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 SAP30O75446 220 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 NUDT14O95848 222 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 VSIG8P0DPA2 414 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 TPPP2P59282 170 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 PAFAH1B2P68402 229 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 MFGE8Q08431 387 aaPredicted RBP10.21□□□□□ -0.78
RTN3-203ENST00000341307 WBP2NLQ6ICG8 309 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 ATG4DQ86TL0 474 aaPredicted RBP10.21□□□□□ -0.78
RTN3-203ENST00000341307 C1orf174Q8IYL3 243 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 OR5H2Q8NGV7 314 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 TMEM171Q8WVE6 324 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 C8orf44Q96CB5 159 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 ELOVL3Q9HB03 270 aa10.21□□□□□ -0.78
RTN3-203ENST00000341307 MRPL27Q9P0M9 148 aaKnown RBP10.21□□□□□ -0.78
RTN3-203ENST00000341307 A0A0A6YYD4 124 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 C9orf172C9J069 976 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 LMX1BO60663 402 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 HBE1P02100 147 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 TAS2R30P59541 319 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 RUNX1Q01196 453 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 ZNF665Q9H7R5 613 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 PRSS50Q9UI38 385 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 PCNX3Q9H6A9 2034 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 CFAP47Q6ZTR5 3102 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 RAD51DO75771 328 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 DUSP3P51452 185 aaPredicted RBP10.2□□□□□ -0.78
RTN3-203ENST00000341307 ZNF266Q14584 549 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 IL13RA2Q14627 380 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 PLAC9Q5JTB6 97 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 SLC23A3Q6PIS1 610 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 FAM89BQ8N5H3 189 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 OR52M1Q8NGK5 317 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 ZNF596Q8TC21 504 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 NAT8Q9UHE5 227 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 RARRES3Q9UL19 164 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
RTN3-203ENST00000341307 GRIFINA4D1Z8 144 aa10.19□□□□□ -0.78
RTN3-203ENST00000341307 RNF212BA8MTL3 300 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms