RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PSG2P11465 335 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 CEBPDP49716 269 aaPredicted RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 SUCLG1P53597 346 aaKnown RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 ZIC1Q15915 447 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 ERASQ7Z444 233 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 TGIF2LYQ8IUE0 185 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 WDR34Q96EX3 536 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 PCGF1Q9BSM1 259 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 SH3BGRL3Q9H299 93 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 WDFY4Q6ZS81 3184 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 HSPB2A8KAH6 182 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 COX7A1P24310 79 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 ARR3P36575 388 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 IL13RA2Q14627 380 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 HSPB2Q16082 182 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 C2orf68Q2NKX9 166 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 RTL10Q7L3V2 364 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 OR5AU1Q8NGC0 362 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 PRSS27Q9BQR3 290 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 MTCH2Q9Y6C9 303 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 VDAC1P21796 283 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 KIR2DL1P43626 348 aaPredicted RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 KIR2DL2P43627 348 aaPredicted RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 SULT1A2P50226 295 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 UBE2L3P68036 154 aaKnown RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 GABRA6Q16445 453 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 ZNF385AQ96PM9 386 aaKnown RBP7.62□□□□□ -1.19
RTN3-202ENST00000339997 SELENOKQ9Y6D0 94 aa7.62□□□□□ -1.19
RTN3-202ENST00000339997 TMEM30CPA0ZSE6 113 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 HELTA6NFD8 242 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 CTSDP07339 412 aaPredicted RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 HTN1P15515 57 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 BCL3P20749 454 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 HLA-DRB5Q30154 266 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 DEFB109BQ30KR1 87 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 SLC35E4Q6ICL7 350 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 RPS4Y2Q8TD47 263 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 TTC9Q92623 222 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 MVB12AQ96EY5 273 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 POM121L2Q96KW2 1035 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 HSPB9Q9BQS6 159 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 MIEN1Q9BRT3 115 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 PLSCR2Q9NRY7 297 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 LOXL2Q9Y4K0 774 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 GRIFINA4D1Z8 144 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 C2CD4DB7Z1M9 353 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 MFNGO00587 321 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 CTDSPLO15194 276 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 MBPP02686 304 aaPredicted RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 HLA-GP17693 338 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 REG1BP48304 166 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 FUT5Q11128 374 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 SMIM21Q3B7S5 101 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 KIAA2026Q5HYC2 2103 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 LILRA6Q6PI73 481 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 NAT8Q9UHE5 227 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 ZNF256Q9Y2P7 627 aaPredicted RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 MFSD2BA6NFX1 497 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 TNFSF15O95150 251 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 WISP3O95389 354 aaPredicted RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 IGHV3-48P01763 117 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 BPIFB3P59826 476 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 RPS23P62266 143 aaKnown RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 RANP62826 216 aaKnown RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 ZNF141Q15928 474 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 ANKRD33Q7Z3H0 272 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 IER2Q9BTL4 223 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 ZNF552Q9H707 407 aaPredicted RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 Q9N2K0 584 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 TRIP12Q14669 1992 aaPredicted RBP7.61□□□□□ -1.19
RTN3-202ENST00000339997 IGKV1-8A0A0C4DH67 115 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 LRRC3CA6NJW4 275 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 CYR61O00622 381 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 PCP4P48539 62 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 PSMB2P49721 201 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 SCGB1D4Q6XE38 83 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 C16orf82Q7Z2V1 217 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 OR8A1Q8NGG7 326 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 OR1B1Q8NGR6 318 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 RND1Q92730 232 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 PGLYRP3Q96LB9 341 aa7.61□□□□□ -1.19
RTN3-202ENST00000339997 FER1L5A0AVI2 2057 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 ORM1P02763 201 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 DSCR4P56555 118 aaPredicted RBP7.6□□□□□ -1.19
RTN3-202ENST00000339997 CEBPEQ15744 281 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 HFEQ30201 348 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 DHRS13Q6UX07 377 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 TCFL5Q9UL49 500 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 CHD5Q8TDI0 1954 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 A0A087WV48 116 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 TRGV10A0A0A0MS01 117 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 ZNF785A8K8V0 405 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 PRRG2O14669 202 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 NDUFB4O95168 129 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 CCL4P13236 92 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 SRP14P37108 136 aaKnown RBP7.6□□□□□ -1.19
RTN3-202ENST00000339997 PPOXP50336 477 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 LAMTOR1Q6IAA8 161 aa7.6□□□□□ -1.19
RTN3-202ENST00000339997 DEGS2Q6QHC5 323 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms