RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 HTD2P86397 168 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 Q3ZCU0 254 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 PRAMEF5Q5TYX0 476 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 HCP5Q6MZN7 132 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 ZNF782Q6ZMW2 699 aaPredicted RBP12.56□□□□□ -0.4
SEC13-201ENST00000337354 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 C15orf40Q8WUR7 153 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 CYYR1Q96J86 154 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 HDHD3Q9BSH5 251 aaPredicted RBP12.56□□□□□ -0.4
SEC13-201ENST00000337354 MS4A7Q9GZW8 240 aaPredicted RBP12.56□□□□□ -0.4
SEC13-201ENST00000337354 MMP27Q9H306 513 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 NIPBLQ6KC79 2804 aaeCLIP12.56□□□□□ -0.4
SEC13-201ENST00000337354 TMEM235A6NFC5 223 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 CTDSP2O14595 271 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 FCGR3AP08637 254 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 EPHA1P21709 976 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 KIR2DS4P43632 304 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 KIR2DS1Q14954 304 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 HMGN3Q15651 99 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 MIDNQ504T8 468 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 Q6ZS49 121 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 PNKDQ8N490 385 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 SETD6Q8TBK2 473 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 DCUN1D5Q9BTE7 237 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 CLEC7AQ9BXN2 247 aa12.55□□□□□ -0.4
SEC13-201ENST00000337354 ZFHX3Q15911 3703 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 IGHV2-26A0A0B4J1V2 119 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 TRDCB7Z8K6 153 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 SDCBPO00560 298 aaPredicted RBP12.54□□□□□ -0.4
SEC13-201ENST00000337354 NPFFO15130 113 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 HLA-DQB1P01920 261 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 NFYBP25208 207 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 PRRX1P54821 245 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 TAS2R20P59543 309 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 FOXB2Q5VYV0 432 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 PRR18Q8N4B5 295 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 ZNF596Q8TC21 504 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 SUCNR1Q9BXA5 334 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
SEC13-201ENST00000337354 RABL2AQ9UBK7 228 aaPredicted RBP12.54□□□□□ -0.4
SEC13-201ENST00000337354 ELF5Q9UKW6 265 aaPredicted RBP12.54□□□□□ -0.4
SEC13-201ENST00000337354 RABL2BQ9UNT1 228 aa12.54□□□□□ -0.4
SEC13-201ENST00000337354 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
SEC13-201ENST00000337354 SVEP1Q4LDE5 3571 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 TOR1AO14656 332 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 DIRAS3O95661 229 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 COX7A1P24310 79 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 PRSS3P35030 304 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 GDNFP39905 211 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 CBX5P45973 191 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 DLX1P56177 255 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 LGALS4P56470 323 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 LOXL3P58215 753 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 KLRD1Q13241 179 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 LY6G6FQ5SQ64 297 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 ZNF626Q68DY1 528 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 Q6ZPA2 131 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 C8orf31Q8N9H6 132 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 BEND2Q8NDZ0 799 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 OR1L1Q8NH94 360 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 OCSTAMPQ9BR26 566 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 MIXL1Q9H2W2 232 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 OR2S2Q9NQN1 319 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 GFOD1Q9NXC2 390 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 GNG12Q9UBI6 72 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 EXTL2Q9UBQ6 330 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 ZNF69Q9UC07 566 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
SEC13-201ENST00000337354 TBL2Q9Y4P3 447 aaKnown RBP12.53□□□□□ -0.4
SEC13-201ENST00000337354 ODF3BA8MYP8 253 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 YPEL1O60688 119 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 RGS11O94810 467 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 ARG1P05089 322 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 HLA-DRB3P79483 266 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
SEC13-201ENST00000337354 LTC4SQ16873 150 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 MINOS1Q5TGZ0 78 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 BAIAP2L2Q6UXY1 529 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 LAX1Q8IWV1 398 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 ZNF286AQ9HBT8 521 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.41
SEC13-201ENST00000337354 PSG11Q9UQ72 335 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 MINOS1-NBL1R4GNA1 71 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 ARHGAP32A7KAX9 2087 aa12.52□□□□□ -0.41
SEC13-201ENST00000337354 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
SEC13-201ENST00000337354 J3QR06 171 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms