RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ATP6V0CP27449 155 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 SUCLG1P53597 346 aaKnown RBP14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 HNF4GQ14541 408 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 MRPL41Q8IXM3 137 aaKnown RBP14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 CPT1CQ8TCG5 803 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 R3HDM4Q96D70 268 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 RAB39BQ96DA2 213 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 MUCL1Q96DR8 90 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 GUCD1Q96NT3 240 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 SPIN2AQ99865 258 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 SPIN2BQ9BPZ2 258 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 PROK2Q9HC23 129 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 DNAJC4Q9NNZ3 241 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 RNF24Q9Y225 148 aa14.22□□□□□ -0.13
CDC42EP4-201ENST00000335793 HLA-HP01893 362 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 SCTP09683 121 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 RBM11P57052 281 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 GAPTQ8N292 157 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 OR2Y1Q8NGV0 311 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 RDH5Q92781 318 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 MOB3AQ96BX8 217 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 STRAPQ9Y3F4 350 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 KLF7O75840 302 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 RUNX1Q01196 453 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 PAX5Q02548 391 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 C16orf54Q6UWD8 224 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 WDR5BQ86VZ2 330 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 OR2V1Q8NHB1 315 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 GPR87Q9BY21 358 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 WDR54Q9H977 334 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 MRPS18CQ9Y3D5 142 aaKnown RBP14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 FREM2Q5SZK8 3169 aa14.21□□□□□ -0.13
CDC42EP4-201ENST00000335793 ZNF724A8MTY0 619 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 DKK1O94907 266 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 BCL3P20749 454 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 HIST1H3AP68431 136 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 SLC23A3Q6PIS1 610 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 C1QL4Q86Z23 238 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 CMTM1Q8IZ96 169 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 SGCZQ96LD1 299 aa14.21□□□□□ -0.14
CDC42EP4-201ENST00000335793 LY6G6EA0A0G2JKS1 128 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 IGHV3-64DA0A0J9YX35 117 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 IRF2P14316 349 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 JOSD1Q15040 202 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 UBALD1Q8TB05 177 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 SF3B5Q9BWJ5 86 aaKnown RBP14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 U3KQA8 63 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 TRAPPC2LH3BP13 241 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 CD33P20138 364 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 SRD5A2P31213 254 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 MLF1P58340 268 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 EIF3IQ13347 325 aaKnown RBP14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF880Q6PDB4 577 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 MKXQ8IYA7 352 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 COMMD1Q8N668 190 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 GPR35Q9HC97 309 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 CCL28Q9NRJ3 127 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 FOXJ2Q9P0K8 574 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 R4GN57 208 aa14.2□□□□□ -0.14
CDC42EP4-201ENST00000335793 C3orf80F5H4A9 247 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 H3BQ15 152 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 K7ESF4 209 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 AMBPP02760 352 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 FGF5P12034 268 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 CCL20P78556 96 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 C18orf12Q96KH6 178 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 GINS3Q9BRX5 216 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 LIPGQ9Y5X9 500 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF705FA8MVS1 300 aaPredicted RBP14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF705DP0CH99 300 aaPredicted RBP14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF705BP0CI00 300 aaPredicted RBP14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 DLK1P80370 383 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 KIAA2026Q5HYC2 2103 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 SPINK14Q6IE38 97 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 C11orf42Q8N5U0 333 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 M1APQ8TC57 530 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF732B4DXR9 585 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 SERPINE2P07093 398 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 S100GP29377 79 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 DYNLT3P51808 116 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 ARF1P84077 181 aaKnown RBP14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 TMEM211Q6ICI0 200 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 VASH2Q86V25 355 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 PLEKHF2Q9H8W4 249 aa14.19□□□□□ -0.14
CDC42EP4-201ENST00000335793 hCG_38984A0A1B0GV85 526 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 IGSF23A1L1A6 192 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 CHST1O43916 411 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 WNT5AP41221 380 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 CYB561P49447 251 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 PRDX4Q13162 271 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 TMEM252Q8N6L7 170 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 BEND2Q8NDZ0 799 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 OR5R1Q8NH85 324 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 BOD1Q96IK1 185 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF488Q96MN9 340 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 TRDCB7Z8K6 153 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 RBX1P62877 108 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 SRPXP78539 464 aa14.18□□□□□ -0.14
CDC42EP4-201ENST00000335793 ZNF154Q13106 437 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms