RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 KCNK7Q9Y2U2 307 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 GON4LQ3T8J9 2241 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 ID4P47928 161 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 PRICKLE4Q2TBC4 344 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 MESTQ5EB52 335 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 MVB12AQ96EY5 273 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 RASL11BQ9BPW5 248 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 SMOC1Q9H4F8 434 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 GRIFINA4D1Z8 144 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 MKRN2OSH3BPM6 223 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 RECKO95980 971 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 HOXA4Q00056 320 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-201ENST00000334504 PAXXQ9BUH6 204 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 STAG3L3P0CL85 134 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 OR4D11Q8NGI4 311 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 OR2Y1Q8NGV0 311 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 PTPMT1Q8WUK0 201 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-201ENST00000334504 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 TMEM189A5PLL7 270 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 GNG7O60262 68 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 HLA-DRB1P01911 266 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 SRIP30626 198 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 ARF6P62330 175 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF519Q8TB69 540 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF418Q8TF45 676 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-201ENST00000334504 TOX2Q96NM4 488 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 DNAJC4Q9NNZ3 241 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 IL36RNQ9UBH0 155 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 FAM157AC9JC47 383 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 NPIPB9F8W1W9 429 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 IGFBP6P24592 240 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-201ENST00000334504 PGLYRP4Q96LB8 373 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 GABRG3Q99928 467 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-201ENST00000334504 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 HLA-DQA1P01909 254 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 CEACAM5P06731 702 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 HKR1P10072 659 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 PIGYQ3MUY2 71 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 SFTPA2Q8IWL1 248 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 SFTPA1Q8IWL2 248 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 FAM222BQ8WU58 562 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 BEX4Q9NWD9 120 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-201ENST00000334504 IL4P05112 153 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF83P51522 516 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 PRSS8Q16651 343 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 NIT1Q86X76 327 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 AMMECR1Q9Y4X0 333 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-201ENST00000334504 C7orf71A4D174 169 aa8.6□□□□□ -1.03
COL4A6-201ENST00000334504 ARID1BQ8NFD5 2236 aaPredicted RBP8.6□□□□□ -1.03
COL4A6-201ENST00000334504 SNRPCP09234 159 aaKnown RBP8.59□□□□□ -1.03
COL4A6-201ENST00000334504 APELAP0DMC3 54 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 FXYD3Q14802 87 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 IZUMO4Q1ZYL8 232 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 OR13G1Q8NGZ3 307 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 FAM216AQ8WUB2 273 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 PPP1R3EQ9H7J1 279 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF665Q9H7R5 613 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 A8MWL6 223 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 GAPDHP04406 335 aaKnown RBP8.59□□□□□ -1.03
COL4A6-201ENST00000334504 VSIG8P0DPA2 414 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 CKS2P33552 79 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 KIAA1644Q3SXP7 199 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 IGHV3-21A0A0B4J1V1 117 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 TMEM210A6NLX4 147 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 OR4A8P0C604 315 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 RSPO2Q6UXX9 243 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-201ENST00000334504 TMEM183AQ8IXX5 376 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 ALX4Q9H161 411 aaPredicted RBP8.59□□□□□ -1.03
COL4A6-201ENST00000334504 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
COL4A6-201ENST00000334504 SERF2P84101 59 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 MGAT2Q10469 447 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 NUP37Q8NFH4 326 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 VSTM2AQ8TAG5 236 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 ASB5Q8WWX0 329 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 PXMP4Q9Y6I8 212 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 RHBDD2Q6NTF9 364 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
COL4A6-201ENST00000334504 TGIF1Q15583 401 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 MAJINQ3KP22 176 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 GCSAMLQ5JQS6 135 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 STXBP6Q8NFX7 210 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TM4SF19Q96DZ7 209 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 GNRHR2Q96P88 292 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 NUDT16L1Q9BRJ7 211 aaKnown RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 FAM206AQ9NX38 181 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 CISD1Q9NZ45 108 aaKnown RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 PRNDQ9UKY0 176 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 ZNF729A6NN14 1252 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-201ENST00000334504 LINC01565O15544 149 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 GLIPR1P48060 266 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM211Q6ICI0 200 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM30AQ9NV96 361 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 ST6GALNAC2Q9UJ37 374 aa8.58□□□□□ -1.04
COL4A6-201ENST00000334504 ZDHHC8Q9ULC8 765 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms