RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 MEF2DQ14814 521 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 C2orf68Q2NKX9 166 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 ZNF880Q6PDB4 577 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 OR13C8Q8NGS7 320 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 TRBV6-6A0A0A6YYG2 114 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 GYPAP02724 150 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 FGF2P09038 288 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 MUC1P15941 1255 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-201ENST00000333213 AESQ08117 197 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 ZMYND11Q15326 602 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 OR5H2Q8NGV7 314 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 WDR89Q96FK6 387 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-201ENST00000333213 SLC2A8Q9NY64 477 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 FXYD6-FXYD2A0A087WZ82 144 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 MDH2P40926 338 aaKnown RBP19.4■□□□□ 0.7
TSEN54-201ENST00000333213 CHRFAM7AQ494W8 412 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 C4orf46Q504U0 113 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 Q6ZS49 121 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 C12orf45Q8N5I9 185 aaPredicted RBP19.4■□□□□ 0.7
TSEN54-201ENST00000333213 LHFPL5Q8TAF8 219 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 FXYD6Q9H0Q3 95 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 LIME1Q9H400 295 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 RIMS4Q9H426 269 aaPredicted RBP19.4■□□□□ 0.7
TSEN54-201ENST00000333213 PLEKHF2Q9H8W4 249 aa19.4■□□□□ 0.7
TSEN54-201ENST00000333213 A0A0D9SG52 128 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 OR4E1P0C645 316 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 TAS2R46P59540 309 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 SRSF7Q16629 238 aaKnown RBP eCLIP19.39■□□□□ 0.7
TSEN54-201ENST00000333213 SCGB2B2Q4G0G5 96 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 PDZD9Q8IXQ8 264 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 C1orf87Q8N0U7 546 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 TPRX1Q8N7U7 411 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 SDSLQ96GA7 329 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 SLC25A32Q9H2D1 315 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 ZNF286AQ9HBT8 521 aa19.39■□□□□ 0.7
TSEN54-201ENST00000333213 PPIAL4EA0A075B759 164 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 PPIAL4DF5H284 164 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 GOSR1O95249 250 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 SIX6O95475 246 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 SCTP09683 121 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 PPIAL4FP0DN26 164 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 CDKN1AP38936 164 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 UBA52P62987 128 aaKnown RBP19.39■□□□□ 0.69
TSEN54-201ENST00000333213 ACTBL2Q562R1 376 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 DCAF12L2Q5VW00 463 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 ZNF788Q6ZQV5 615 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 GAFA1Q96PS6 74 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 CCL13Q99616 98 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 MFFQ9GZY8 342 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 RAB1BQ9H0U4 201 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 EHFQ9NZC4 300 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 PPIAL4AQ9Y536 164 aa19.39■□□□□ 0.69
TSEN54-201ENST00000333213 DISC1C4P0D8 188 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 LGALS8O00214 317 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 ZNF345Q14585 488 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 HFEQ30201 348 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 IGSF11Q5DX21 431 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 ZNF660Q6AZW8 331 aaPredicted RBP19.38■□□□□ 0.69
TSEN54-201ENST00000333213 SP5Q6BEB4 398 aaPredicted RBP19.38■□□□□ 0.69
TSEN54-201ENST00000333213 C11orf88Q6PI97 169 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 CSMD2Q7Z408 3487 aa19.38■□□□□ 0.69
TSEN54-201ENST00000333213 K7N7A8 449 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 TNFRSF13BO14836 293 aaPredicted RBP19.37■□□□□ 0.69
TSEN54-201ENST00000333213 HLA-GP17693 338 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 GLIPR1P48060 266 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 HERPUD1Q15011 391 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 ALKAL2Q6UX46 152 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 BVESQ8NE79 360 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 SNX22Q96L94 193 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 CXorf58Q96LI9 332 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 LINC00052Q96N35 136 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 DNTTIP1Q9H147 329 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 MBNL3Q9NUK0 354 aaKnown RBP19.37■□□□□ 0.69
TSEN54-201ENST00000333213 FBXO9Q9UK97 447 aaPredicted RBP19.37■□□□□ 0.69
TSEN54-201ENST00000333213 IGKV1-6A0A0C4DH72 117 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 NDUFS7O75251 213 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 IFNA6P05013 189 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 FBN2P35556 2912 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 TLE4Q04727 773 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 SLC35E4Q6ICL7 350 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 ARRDC1Q8N5I2 433 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 FAM216BQ8N7L0 139 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 COQ8AQ8NI60 647 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 PRRT1Q99946 306 aa19.37■□□□□ 0.69
TSEN54-201ENST00000333213 TRAV38-1A0A0B4J264 116 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 J3QKU1 62 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 FCN3O75636 299 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 TK1P04183 234 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 SLC25A4P12235 298 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 KCNJ3P48549 501 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 LY6G6FQ5SQ64 297 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 ATPAF1Q5TC12 328 aaPredicted RBP19.36■□□□□ 0.69
TSEN54-201ENST00000333213 AADACL3Q5VUY0 350 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 LHFPL1Q86WI0 220 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 FGFRL1Q8N441 504 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 ZNF561Q8N587 486 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 OR5M8Q8NGP6 311 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 VPS13CQ709C8 3753 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 USF3Q68DE3 2245 aa19.36■□□□□ 0.69
TSEN54-201ENST00000333213 AKAP6Q13023 2319 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms