RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RAB40CQ96S21 281 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 RASL10BQ96S79 203 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 VAMP8Q9BV40 100 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 COPS7AQ9UBW8 275 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 IGHV5-51A0A0C4DH38 117 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 SPRY1O43609 319 aaPredicted RBP20.91■□□□□ 0.94
SOX1-201ENST00000330949 LILRA1O75019 489 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 UCP1P25874 307 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 TMEM267Q0VDI3 215 aaPredicted RBP20.91■□□□□ 0.94
SOX1-201ENST00000330949 CARD17Q5XLA6 110 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 BRICD5Q6PL45 260 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 CMTM2Q8TAZ6 248 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 MRPL30Q8TCC3 161 aaKnown RBP20.91■□□□□ 0.94
SOX1-201ENST00000330949 NAT6Q93015 286 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 LRRC61Q9BV99 259 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 AURKAIP1Q9NWT8 199 aaPredicted RBP20.91■□□□□ 0.94
SOX1-201ENST00000330949 C20orf202A1L168 122 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 C2orf72A6NCS6 295 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 OR2J2O76002 312 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 FOSL2P15408 326 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 CHRNB4P30926 498 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 TPTE2P1Q5T6R2 138 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 FAM180AQ6UWF9 173 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 Q6ZSR3 168 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 SLC39A9Q9NUM3 307 aa20.91■□□□□ 0.94
SOX1-201ENST00000330949 PDGFBP01127 241 aaPredicted RBP20.9■□□□□ 0.94
SOX1-201ENST00000330949 IL3RAP26951 378 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 PAFAH1B2P68402 229 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 LRP11Q86VZ4 500 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 TAAR3PQ9P1P4 343 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 PAM16Q9Y3D7 125 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 PIAS2O75928 621 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 VENTXO95231 258 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 SLC35E1Q96K37 410 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 PXMP4Q9Y6I8 212 aa20.9■□□□□ 0.94
SOX1-201ENST00000330949 IGKV3D-11A0A0A0MRZ8 115 aa20.89■□□□□ 0.94
SOX1-201ENST00000330949 GYPAP02724 150 aa20.89■□□□□ 0.94
SOX1-201ENST00000330949 TPPP2P59282 170 aa20.89■□□□□ 0.94
SOX1-201ENST00000330949 TMEM211Q6ICI0 200 aa20.89■□□□□ 0.94
SOX1-201ENST00000330949 SLC7A10Q9NS82 523 aa20.89■□□□□ 0.94
SOX1-201ENST00000330949 NCOA6Q14686 2063 aaPredicted RBP20.89■□□□□ 0.93
SOX1-201ENST00000330949 GCH1P30793 250 aa20.89■□□□□ 0.93
SOX1-201ENST00000330949 TFPI2P48307 235 aa20.89■□□□□ 0.93
SOX1-201ENST00000330949 WDYHV1Q96HA8 205 aa20.89■□□□□ 0.93
SOX1-201ENST00000330949 MANBALQ9NQG1 85 aa20.89■□□□□ 0.93
SOX1-201ENST00000330949 FOXJ2Q9P0K8 574 aa20.89■□□□□ 0.93
SOX1-201ENST00000330949 ABCA7Q8IZY2 2146 aa20.89■□□□□ 0.93
SOX1-201ENST00000330949 NUPR1O60356 82 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 TDRG1Q3Y452 100 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 C16orf47Q6ZP98 133 aaPredicted RBP20.88■□□□□ 0.93
SOX1-201ENST00000330949 LMX1AQ8TE12 382 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 LEMD1Q68G75 181 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 SPOCK3Q9BQ16 436 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 TMEM9BQ9NQ34 198 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 COL5A1P20908 1838 aaPredicted RBP20.88■□□□□ 0.93
SOX1-201ENST00000330949 THADAQ6YHU6 1953 aa20.88■□□□□ 0.93
SOX1-201ENST00000330949 CNOT4O95628 575 aaKnown RBP20.87■□□□□ 0.93
SOX1-201ENST00000330949 MALLQ13021 153 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 LRRC75BQ2VPJ9 315 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 PIGYQ3MUY2 71 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 DTX1Q86Y01 620 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 OR51B6Q9H340 312 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 A0A0U1RQK1 487 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 ZNF320A2RRD8 509 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 MYBPHQ13203 477 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 DEFB133Q30KQ1 61 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 ZNF818PQ6ZRF7 136 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 ZNF525Q8N782 197 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 OR5D13Q8NGL4 314 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 RNASE8Q8TDE3 154 aaKnown RBP20.87■□□□□ 0.93
SOX1-201ENST00000330949 EXTL1Q92935 676 aa20.87■□□□□ 0.93
SOX1-201ENST00000330949 A0A1B0GUS0 222 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 TRAF3IP2O43734 574 aaPredicted RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 RPS18P62269 152 aaKnown RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 SELENOTP62341 195 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 C17orf67Q0P5P2 114 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 GAPTQ8N292 157 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 OSR2Q8N2R0 312 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 FBRSQ9HAH7 460 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 PDCD6O75340 191 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 MYF5P13349 255 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 GUCA1AP43080 201 aaPredicted RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 SUMO3P55854 103 aaPredicted RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 PPP1CBP62140 327 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 HBG1P69891 147 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 HBG2P69892 147 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 FAM78BQ5VT40 261 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 Q6ZWC4 215 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 GJC3Q8NFK1 279 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 THAP3Q8WTV1 239 aaPredicted RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 KLHDC7BQ96G42 594 aa20.86■□□□□ 0.93
SOX1-201ENST00000330949 RNPS1Q15287 305 aaKnown RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 CNN3Q15417 329 aaKnown RBP20.86■□□□□ 0.93
SOX1-201ENST00000330949 TESK1Q15569 626 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 ASCL4Q6XD76 172 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 ADPRHL1Q8NDY3 354 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 OR4F5Q8NH21 305 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 OR4F4Q96R69 305 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 ST3GAL6Q9Y274 331 aa20.85■□□□□ 0.93
SOX1-201ENST00000330949 HS3ST3A1Q9Y663 406 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms