RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CLDND2Q8NHS1 167 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 C8orf46Q8TAG6 207 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 TAS2R3Q9NYW6 316 aa8.47□□□□□ -1.05
VIPAS39-201ENST00000327028 IGHV4-30-2A0A087WSY4 118 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 TRBV6-7A0A0A0MS04 114 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF729A6NN14 1252 aaPredicted RBP8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 BET1O15155 118 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 IL2RGP31785 369 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 TSPAN5P62079 268 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 GNB2P62879 340 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 CLEC12BQ2HXU8 276 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 SCGB2B2Q4G0G5 96 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 ESCO2Q56NI9 601 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 ZNF660Q6AZW8 331 aaPredicted RBP8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 IDO2Q6ZQW0 420 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 BTN2A1Q7KYR7 527 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 LHFPL1Q86WI0 220 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 FAM185AQ8N0U4 392 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 PRR18Q8N4B5 295 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 DRAXINQ8NBI3 349 aaPredicted RBP8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 ARL11Q969Q4 196 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 GALMQ96C23 342 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 RAB39BQ96DA2 213 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 LINC00574Q9H8X3 128 aa8.46□□□□□ -1.05
VIPAS39-201ENST00000327028 MALRD1Q5VYJ5 2156 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 KBTBD11-OT1A0A1B0GTJ5 212 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 MEX3AA1L020 520 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 SLC25A16P16260 332 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 LMO4P61968 165 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 ZNF273Q14593 569 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 RBMS2Q15434 407 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 C17orf58Q2M2W7 97 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 TMEM30BQ3MIR4 351 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 TMEM200BQ69YZ2 307 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 DHRS11Q6UWP2 260 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 GLCCI1Q86VQ1 547 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 UBALD1Q8TB05 177 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 GIMAP1Q8WWP7 306 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 IL1F10Q8WWZ1 152 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 GINS4Q9BRT9 223 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 GAL3ST2Q9H3Q3 398 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 NUBP2Q9Y5Y2 271 aa8.46□□□□□ -1.06
VIPAS39-201ENST00000327028 DOCK11Q5JSL3 2073 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 A8MXK9 166 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 F2RL2O00254 374 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 NDUFB6O95139 128 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 TCRBP04435 133 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 HTD2P86397 168 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 CCBE1Q6UXH8 406 aaPredicted RBP8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 H1FOOQ8IZA3 346 aaPredicted RBP8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 OR13C8Q8NGS7 320 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 OR6F1Q8NGZ6 308 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 OR10J5Q8NHC4 309 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 TERB2Q8NHR7 220 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 ZNF714Q96N38 554 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 SLC25A21Q9BQT8 299 aaPredicted RBP8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 ZNF2Q9BSG1 426 aaPredicted RBP8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 OR1A1Q9P1Q5 309 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 RPUSD1Q9UJJ7 312 aaKnown RBP8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 KIAA1324LA8MWY0 1029 aaPredicted RBP8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 TUSC2O75896 110 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 FCGR2CP31995 323 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 CD276Q5ZPR3 534 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 PLET1Q6UQ28 207 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 LY6G5BQ8NDX9 201 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 MRGPRFQ96AM1 343 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 FXYD6Q9H0Q3 95 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 ZNF69Q9UC07 566 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 SLC23A1Q9UHI7 598 aa8.45□□□□□ -1.06
VIPAS39-201ENST00000327028 IGHV4-61A0A0C4DH41 118 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 C22orf46C9J442 243 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 PHF1O43189 567 aaPredicted RBP8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 ZBTB25P24278 435 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 ECI1P42126 302 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 DLX6P56179 175 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 AADACL3Q5VUY0 350 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 OR10A7Q8NGE5 316 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 RFESDQ8TAC1 157 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 CREB3L1Q96BA8 519 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 UPRTQ96BW1 309 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 TOLLIPQ9H0E2 274 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 C20orf85Q9H1P6 137 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 MMP28Q9H239 520 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 IDI2-AS1Q9NZ38 188 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 JPT1Q9UK76 154 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 LOC105371242A0A075B767 164 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 A0A1W2PPH5 198 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 OR5H14A6NHG9 310 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 HSPA12AO43301 675 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 PPYP01298 95 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 HEXAP06865 529 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 ZNF728P0DKX0 622 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 CCL3L1P16619 93 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 AADACP22760 399 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 NFYAP23511 347 aaPredicted RBP8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 FPR2P25090 351 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 HERV-K104P61576 105 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 GNMTQ14749 295 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 Q5PR19 223 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms