RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 GINS3Q9BRX5 216 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 GPR87Q9BY21 358 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 FAM117AQ9C073 453 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 OR51M1Q9H341 326 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 TRBV6-7A0A0A0MS04 114 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 FGF5P12034 268 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 MEOX1P50221 254 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 PCOLCEQ15113 449 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
TCOF1-201ENST00000323668 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
TCOF1-201ENST00000323668 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
TCOF1-201ENST00000323668 DEFB108AA8MXU0 73 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 HSBP1L1C9JCN9 74 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 OR7C2O60412 319 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 FCGR3BO75015 233 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 CLPSP04118 112 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 ETV3LQ6ZN32 361 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
TCOF1-201ENST00000323668 DEFB108BQ8NET1 73 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 MRGPRDQ8TDS7 321 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 TP53RKQ96S44 253 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 ZNF331Q9NQX6 463 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-201ENST00000323668 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 NOTCH4Q99466 2003 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 A0A0A6YYD4 124 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 OR5H1A6NKK0 313 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 TNFSF15O95150 251 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 CRYAAP02489 173 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 TAS2R45P59539 299 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 TGIF1Q15583 401 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 LILRB1Q8NHL6 650 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-201ENST00000323668 BOD1Q96IK1 185 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 CHCHD2Q9Y6H1 151 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-201ENST00000323668 NPBWR2P48146 333 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
TCOF1-201ENST00000323668 MANBALQ9NQG1 85 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 METTL1Q9UBP6 276 aaKnown RBP12.73□□□□□ -0.37
TCOF1-201ENST00000323668 TRGC2P03986 189 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 MAGEA5P43359 124 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 DBX2Q6ZNG2 339 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 OR1K1Q8NGR3 316 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 DTD1Q8TEA8 209 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
TCOF1-201ENST00000323668 CCL1P22362 96 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 PLGLAQ15195 96 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 SPINK9Q5DT21 86 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 OR5D13Q8NGL4 314 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 ABHD5Q8WTS1 349 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 WNT5BQ9H1J7 359 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 DOCK9Q9BZ29 2069 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 A0A087X0M5 115 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 A0A1B0GX30 115 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 PGLYRP1O75594 196 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-201ENST00000323668 PMS2P11Q13670 270 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
TCOF1-201ENST00000323668 MRPL30Q8TCC3 161 aaKnown RBP12.72□□□□□ -0.37
TCOF1-201ENST00000323668 TXN2Q99757 166 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 DOK5Q9P104 306 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 ZNF586Q9NXT0 402 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
TCOF1-201ENST00000323668 SNRNP200O75643 2136 aaKnown RBP12.71□□□□□ -0.37
TCOF1-201ENST00000323668 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 AQP7O14520 342 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 NDUFB7P17568 137 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 LTBRP36941 435 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 SLC35E1Q96K37 410 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 ARRDC1-AS1Q9H2J1 176 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 FRMPD3Q5JV73 1810 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 LYZL6O75951 148 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 APOA2P02652 100 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 CFPP27918 469 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 FAM78BQ5VT40 261 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 SIGLECL1Q8N7X8 197 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 GPR146Q96CH1 333 aa12.71□□□□□ -0.37
TCOF1-201ENST00000323668 CXorf65A6NEN9 183 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 LHFPL1Q86WI0 220 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 ANAPC16Q96DE5 110 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 POM121Q96HA1 1249 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 RNF122Q9H9V4 155 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 PROCRQ9UNN8 238 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 CLDN16Q9Y5I7 305 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 C11orf94C9JXX5 98 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.38
TCOF1-201ENST00000323668 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.38
TCOF1-201ENST00000323668 C3AR1Q16581 482 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 HIKESHIQ53FT3 197 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 FAM209BQ5JX69 171 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 ZNF818PQ6ZRF7 136 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 ZBTB34Q8NCN2 500 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 OR2M7Q8NG81 312 aa12.71□□□□□ -0.38
TCOF1-201ENST00000323668 ZNHIT1O43257 154 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms