RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ADIRFQ15847 76 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 FAM90A2PQ658T7 463 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 NFAM1Q8NET5 270 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-201ENST00000318023 OR4N2Q8NGD1 307 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ACY3Q96HD9 319 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 SDF2Q99470 211 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ABI3Q9P2A4 366 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 GOSR1O95249 250 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ATP6V0CP27449 155 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 PTGER4P35408 488 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 PLGLB1Q02325 96 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 MFGE8Q08431 387 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-201ENST00000318023 SLC48A1Q6P1K1 146 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 DPPA3Q6W0C5 159 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 C16orf82Q7Z2V1 217 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF709Q8N972 641 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 OR10G3Q8NGC4 313 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ADAMTS18Q8TE60 1221 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 RASL10BQ96S79 203 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ANGPTL4Q9BY76 406 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ELOVL3Q9HB03 270 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 B9D1Q9UPM9 204 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ROS1P08922 2347 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 GTF3C1Q12789 2109 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 F6UZH7 168 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF41P51814 821 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-201ENST00000318023 MLF1P58340 268 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 RUNX1Q01196 453 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 MEP1BQ16820 701 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 TMEM183BQ1AE95 376 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 FAM180AQ6UWF9 173 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 GRINAQ7Z429 371 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 NKAIN3Q8N8D7 197 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 GATSQ8NAP1 163 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 OR5L2Q8NGL0 311 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 OR13G1Q8NGZ3 307 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 CLDND2Q8NHS1 167 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 C16orf52Q8NHV5 167 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ASB5Q8WWX0 329 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 DYRK2Q92630 601 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 OR8B4Q96RC9 309 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 TBL1XR1Q9BZK7 514 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 NXF5Q9H1B4 397 aaKnown RBP8.09□□□□□ -1.11
CAPN3-201ENST00000318023 MMP25Q9NPA2 562 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ARHGAP21Q5T5U3 1957 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 AQP7P3A6NL99 342 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 B4DEV8 164 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 CEACAM4O75871 244 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 SSR4P51571 173 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 IL24Q13007 206 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 DUSP8Q13202 625 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 SP6Q3SY56 376 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 FBLN7Q53RD9 439 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF506Q5JVG8 444 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ZAR1Q86SH2 424 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 MARCH3Q86UD3 253 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 SAXO1Q8IYX7 474 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF721Q8TF20 911 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 OR10A5Q9H207 317 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF703Q9H7S9 590 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-201ENST00000318023 EHFQ9NZC4 300 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 SLC7A11Q9UPY5 501 aa8.09□□□□□ -1.11
CAPN3-201ENST00000318023 TRAV17A0A0B4J275 112 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 A0A0B4J2E0 115 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 TRGV8A0A0C4DH27 118 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 A0A1B0GX12 115 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 PINLYPA6NC86 204 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 SLC33A1O00400 549 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 NEURL1O76050 574 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 AGFG2O95081 481 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 DBHP09172 617 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CCL3P10147 92 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 HINT1P49773 126 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 RNFT1Q5M7Z0 435 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 TPTE2P1Q5T6R2 138 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CDC20BQ86Y33 519 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 LRRC25Q8N386 305 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 FGGYQ96C11 551 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 SPACA5Q96QH8 159 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 ST6GALNAC5Q9BVH7 336 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 RBKSQ9H477 322 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CALHM2Q9HA72 323 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 PHF3Q92576 2039 aaKnown RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 E5RGE8 158 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 HLA-DQA2P01906 255 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CELA3AP09093 270 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CFPP27918 469 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CNN1P51911 297 aaKnown RBP8.08□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF92Q03936 586 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 Q6ZS92 163 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 Q6ZWC4 215 aa8.08□□□□□ -1.12
CAPN3-201ENST00000318023 CORO2AQ92828 525 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms